recodeGenotypes: recodeGenotypes
In BGLRutils: Utilities for Bayesian Generalized Linear Regression
Description
Usage
Arguments
Author(s)
View source: R/recodeGenotypes.R
Description
This function recodes a binary file with allele codes to
0,1,2 and NA format.
Value Interpretation
A A
C C
G G
T T
R A o G
Y C o T
N uknown base
+ +
O - o +
- deletion
H reserved
V reserved
Usage
1
recodeGenotypes(dataBase,naCode=9)
Arguments
dataBase
Location of the dataBase.
naCode
missing value indicator in the dataBase, the default value is 9.
Author(s)
Paulino Perez, Gustavo de los Campos, John Hickey
BGLRutils documentation built on May 2, 2019, 4:48 p.m.
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Description Usage Arguments Author(s)
View source: R/recodeGenotypes.R
Description
This function recodes a binary file with allele codes to 0,1,2 and NA format.
| Value | Interpretation |
| A | A |
| C | C |
| G | G |
| T | T |
| R | A o G |
| Y | C o T |
| N | uknown base |
| + | + |
| O | - o + |
| - | deletion |
| H | reserved |
| V | reserved |
Usage
1 | recodeGenotypes(dataBase,naCode=9)
|
Arguments
dataBase |
Location of the dataBase. |
naCode |
missing value indicator in the dataBase, the default value is 9. |
Author(s)
Paulino Perez, Gustavo de los Campos, John Hickey
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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