CorrBin: Nonparametrics with Clustered Binary and Multinomial Data
Version 1.5

This package implements non-parametric analyses for clustered binary and multinomial data. The elements of the cluster are assumed exchangeable, and identical joint distribution (also known as marginal compatibility, or reproducibility) is assumed for clusters of different sizes. A trend test based on stochastic ordering is implemented.

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AuthorAniko Szabo [aut, cre]
Date of publication2017-04-05 21:34:10
MaintainerAniko Szabo <aszabo@mcw.edu>
LicenseGPL (>=2)
Version1.5
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("CorrBin", repos="http://R-Forge.R-project.org")

Man pages

CBData: Create a 'CBdata' object from a data frame.
CMData: Create a 'CMdata' object from a data frame.
CorrBin-internal: Internal CorrBin objects
CorrBin-package: Nonparameterics for Correlated Binary and Multinomial Data
dehp: Developmental toxicology study of DEHP in mice
egde: EGDE data
Extract: Extract from a CBData or CMData object
GEE.trend.test: GEE-based trend test
jointprobs: Estimate joint event probabilities for multinomial data
mc.est: Distribution of the number of responses assuming marginal...
mc.test.chisq: Test the assumption of marginal compatibility
multi.corr: Extract correlation coefficients from joint probability...
multinom.gen: Functions for generating multinomial outcomes
NOSTASOT: Finding the NOSTASOT dose
pdf: Parametric distributions for correlated binary data
ran.CBData: Generate random correlated binary data
ran.CMData: Generate a random CMData object
read.CBData: Read data from external file into a CBData object
read.CMData: Read data from external file into a CMData object
RS.trend.test: Rao-Scott trend test
shelltox: Shell Toxicology data
soControl: Control values for order-constrained fit
SO.LRT: Likelihood-ratio test statistic
SO.mc.est: Order-restricted MLE assuming marginal compatibility
SO.trend.test: Likelihood ratio test of stochastic ordering
trend.test: Test for increasing trend with correlated binary data
uniprobs: Extract univariate marginal probabilities from joint...
unwrap: Unwrap a clustered object

Functions

.required Man page
CBData Man page Source code
CMData Man page Source code
CorrBin Man page
CorrBin-package Man page
DownUpMatrix Man page Source code
Extract Man page
GEE.trend.test Man page Source code
Marginals Man page Source code
NOSTASOT Man page Source code
RS.trend.test Man page Source code
SO.LRT Man page Source code
SO.mc.est Man page Source code
SO.trend.test Man page Source code
[.CBData Man page
[.CMData Man page
betabin.pdf Man page Source code
corr.from.pi Man page Source code
corr.from.tau Man page Source code
dehp Man page
egde Man page
jointprobs Man page Source code
mChoose Man page Source code
mChooseTable Man page Source code
mc.est Man page Source code
mc.est.CBData Man page Source code
mc.est.CMData Man page Source code
mc.est.raw Man page Source code
mc.est.raw.CMData Source code
mc.test.chisq Man page Source code
mc.test.chisq.CBData Man page Source code
mc.test.chisq.CMData Man page Source code
mg.DirMult Man page Source code
mg.LogitNorm Man page Source code
mg.MixMult Man page Source code
mg.Resample Man page Source code
multi.corr Man page Source code
multinom.gen Man page
p.from.tau Man page Source code
pdf Man page
qpower.pdf Man page Source code
ran.CBData Man page Source code
ran.CMData Man page Source code
read.CBData Man page Source code
read.CMData Man page Source code
shelltox Man page
soControl Man page Source code
tau.from.pi Man page Source code
trend.test Man page Source code
uniprobs Man page Source code
unwrap Man page Source code
unwrap.CBData Man page Source code
unwrap.CMData Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/CBData.R
R/CMData.R
R/CorrBin-package.R
R/ExchMultinomial.R
R/Reprod.R
R/aaa-generics.R
R/aaa-generics1.R
build
build/vignette.rds
data
data/dehp.rda
data/egde.rda
data/shelltox.rda
inst
inst/doc
inst/doc/CorrBinVignette.R
inst/doc/CorrBinVignette.Rnw
inst/doc/CorrBinVignette.pdf
man
man/CBData.Rd
man/CMData.Rd
man/CorrBin-internal.Rd
man/CorrBin-package.Rd
man/Extract.Rd
man/GEE.trend.test.Rd
man/NOSTASOT.Rd
man/RS.trend.test.Rd
man/SO.LRT.Rd
man/SO.mc.est.Rd
man/SO.trend.test.Rd
man/dehp.Rd
man/egde.Rd
man/jointprobs.Rd
man/mc.est.Rd
man/mc.test.chisq.Rd
man/multi.corr.Rd
man/multinom.gen.Rd
man/pdf.Rd
man/ran.CBData.Rd
man/ran.CMData.Rd
man/read.CBData.Rd
man/read.CMData.Rd
man/shelltox.Rd
man/soControl.Rd
man/trend.test.Rd
man/uniprobs.Rd
man/unwrap.Rd
src
src/ReprodCalcs.c
vignettes
vignettes/CorrBinVignette.Rnw
vignettes/ShellTox.txt
CorrBin documentation built on May 21, 2017, 3:52 a.m.