DanteR: Proteomics data analysis tool

Proteomics data analysis tool

AuthorTom Taverner
Date of publication2011-05-04 08:03:04
MaintainerTom Taverner <thomas.taverner@pnl.gov>
LicenseGPL (>= 2)
Version0.1.1

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Files in this package

DanteR
DanteR/R
DanteR/R/aaaStart.r
DanteR/R/SpectralCounting.R DanteR/R/MAD.R DanteR/R/QQplot.R DanteR/R/PlotXY.R DanteR/R/MBFilter.R DanteR/R/SVDimpute.R DanteR/R/KNNWimpute.R DanteR/R/CorrelationHeatmap.R DanteR/R/ShapiroWilks.R DanteR/R/overLapper.R
DanteR/R/CensorANOVA.r
DanteR/R/ImputeData.R
DanteR/R/NewQuantileN.r
DanteR/R/Merge.R DanteR/R/ANOVA.R DanteR/R/VennPlot.R DanteR/R/PAdjust.R
DanteR/R/CorrScatterPlot.r
DanteR/R/LinearRegression.R
DanteR/R/PlotDataAgainstMean.r
DanteR/R/VolcanoPlot.R
DanteR/R/NewDataFrame.r
DanteR/R/ReadTable.r
DanteR/R/MAplots.R
DanteR/R/gfile_temp.r
DanteR/R/Histogram.R DanteR/R/KruskalWalis.R
DanteR/R/CentralTendency.r
DanteR/R/PCAplot.R DanteR/R/PlotRows.R DanteR/R/MergeDataColumns.R DanteR/R/CorrelationScatterPlot.R DanteR/R/eigen_norm_addon.R DanteR/R/MiscCommands.R DanteR/R/RRollupPlots.R DanteR/R/NonParametricMethods.R
DanteR/R/DanteR.r
DanteR/R/VennDiagrams2.R DanteR/R/settings.R DanteR/R/Metadata.R DanteR/R/ZRollup.R DanteR/R/LogTransform.R
DanteR/R/GetDifferentiallyExpressed.r
DanteR/R/FilterOnANOVA.R DanteR/R/VennDiagrams.R
DanteR/R/PatternScore.r
DanteR/R/FilterMissing.R DanteR/R/DataCleaning.R DanteR/R/Wilcoxon.R DanteR/R/QuantileN.R
DanteR/R/SaveTables.r
DanteR/R/EigenMS.R
DanteR/R/OpenQRollupCSV.r
DanteR/R/zzzDialogs.r
DanteR/R/RRollup.R
DanteR/R/HeatmapClusters.r
DanteR/R/Filter.r
DanteR/R/ColorByFactor.r
DanteR/R/FilterOnRowIds.R
DanteR/R/LoadQRollupXLSX.r
DanteR/R/CorrelationEllipses.R DanteR/R/PeptideCount.R DanteR/R/AnovaMethods.R DanteR/R/QRollUp.R DanteR/R/Correlation2Dmatrix.R DanteR/R/Boxplots.R DanteR/R/FoldChanges.R
DanteR/R/MBImpute.r
DanteR/R/LoessNormalization.R
DanteR/NAMESPACE
DanteR/inst
DanteR/inst/doc
DanteR/inst/doc/crosslink_icon.png
DanteR/inst/doc/RRollup.png
DanteR/inst/doc/Rprofile.site
DanteR/inst/doc/pattern.png
DanteR/inst/doc/LogTransform.png
DanteR/inst/doc/smoosh.png
DanteR/inst/doc/new-file.png
DanteR/inst/doc/PCAplot.png
DanteR/inst/doc/aggregate.PNG
DanteR/inst/doc/save-file-1.png
DanteR/inst/doc/fisher.PNG
DanteR/inst/doc/CorrScatterPlot.PNG
DanteR/inst/doc/refresh.PNG
DanteR/inst/doc/ZRollup.png
DanteR/inst/doc/Histogram.png
DanteR/inst/doc/ellipse.PNG
DanteR/inst/doc/QQ.png
DanteR/inst/doc/merge.png
DanteR/inst/doc/define-factors.png
DanteR/inst/doc/venn.png
DanteR/inst/doc/QRollup.png
DanteR/inst/doc/nova.PNG
DanteR/inst/doc/RRollup2.png
DanteR/inst/doc/summarize.png
DanteR/inst/doc/bigredx.png
DanteR/inst/doc/dante.png
DanteR/inst/doc/volcanoplot1.png
DanteR/inst/doc/HeatmapClusters.png
DanteR/inst/doc/Rollup.png
DanteR/inst/doc/PatternScore.PNG
DanteR/inst/doc/QQplot.png
DanteR/inst/doc/alias.png
DanteR/inst/doc/anova.png
DanteR/inst/doc/plot_against_row_means.png
DanteR/inst/doc/CorrelationPlot.png
DanteR/inst/doc/cogwheel.png
DanteR/inst/doc/save-file-2.png
DanteR/inst/doc/alias-off.png
DanteR/inst/doc/ma.png
DanteR/inst/doc/open-file.png
DanteR/inst/doc/scatter3d.PNG
DanteR/inst/doc/scatter3.PNG
DanteR/inst/doc/LoessNormalization.png
DanteR/inst/doc/Boxplots.png
DanteR/inst/doc/scatter.PNG
DanteR/inst/doc/filter.PNG
DanteR/DESCRIPTION
DanteR/ChangeLog
DanteR/man
DanteR/man/DanteR.rd
DanteR/man/get.dataset.row.metadata.fields.rd
DanteR/man/get.dataset.factors.Rd
DanteR/man/ANOVA.rd
DanteR/man/get.ProtInfo.Rd DanteR/man/get.factors.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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