ntot_NT_Liver-extdata: DeMix Data

In DeMixSampleData: 'DeMix' Sample Data

Description

This dataset consists of a matrix of gene expressions after the RMA normalization, which includes 211 samples (the first 50 samples are normal controls, and the remaining 161 are tumor mixed samples). It is available from ref [1].

Author(s)

P. Roebuck [e-mail]

Source

Where'd it come from?

References

[1] Shen-Orr SS, Tibshirani R, Khatri P, Bodian DL, Staedtler F, Perry NM, Hastie T, Sarwal MM, Davis MM, & Butte AJ.
Cell type-specific gene expression differences in complex tissues.
Nature Method (2010) 7(4): 287-289.
https://doi.org/10.1038/nmeth.1439

Examples

## Path to raw data directory
extdata.dir <- system.file("extdata", package="DeMixSampleData")
extdata.dir

## Directory Listing
files <- list.files(extdata.dir, full.names=TRUE)
files

DeMixSampleData documentation built on May 2, 2019, 6:47 p.m.