FLCore: Core package of FLR, fisheries modelling in R.
Version 2.5.0

FLCore contains the core classes and methods for FLR, a framework for fisheries modelling and management strategy simulation in R. Developed by a team of fisheries scientists in various countries. More information can be found at http://flr-project.org/, including a development mailing list.

AuthorFLR Team and various contributors. Initial design by Laurence T. Kell & Philippe Grosjean.
Date of publication2013-04-25 16:02:31
MaintainerFLR Team <flr-team@flr-project.org>
LicenseGPL-2
Version2.5.0
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("FLCore", repos="http://R-Forge.R-project.org")

Getting started

Package overview

Popular man pages

Extract: Extract or Replace Parts of an FLR Object
FLCohorts-class: Class FLCohorts
FLPar-class: Class FLPar
FLQuantPoint-accesors: Method lowq
nls: Method nls
pv: Population variability
SRModels: Stock-Recruitment models
See all...

All man pages Function index File listing

Man pages

AIC: Akaike information criterion (AIC) method
apply: Method apply
Arith: Arithmetic methods for FLQuant objects
as.data.frame: Method as.data.frame
asOld: Old S3 coercion methods
BIC: Bayesian information criterion (BIC) method
bkey: Generate key for bubbles plot
bubbles: Bubbles plot
catchNames: Method catchNames
ccplot: Catch-curves plot
coerce: Method coerce
computeCatch: Methods to compute total catch, landings, discards and stock...
createFLAccesors: Create accesor methods for a given class
cv: Coefficient of Variation of FLR objects with multiple...
data: FLCore datasets
dimnames: Modify dimnames of an FLQuant
dims: List with information on object dimensions
expand: Trim FLR objects using named dimensions
Extract: Extract or Replace Parts of an FLR Object
fbar: Calculates mean harvest rate or fishing mortality
FLArray-class: Class FLArray
FLBiol-class: Class FLBiol
FLBiols-class: Class FLBiols
flc2flq: Coerce FLCohort into FLQuant.
FLCatch-accessors: Accesor and replacement methods for the FLCatch class
FLCatch-class: Class FLCatch
FLCatches-class: Class FLCatches
FLCohort-class: Class FLCohort
FLCohorts-class: Class FLCohorts
FLComp-class: Class FLComp
FLCore-accesors: Accesor and replacement methods for complex S4 classes
FLCore-internal: FLCore-internal
FLCore-package: Core package of FLR, fisheries modelling in R.
FLFleet-class: Class FLFleet
FLFleets-class: Class FLFleets
FLIndex-class: Class FLIndex
FLIndices-class: Class FLIndices
FLlst-class: Class FLlst
FLMetier-class: Class FLMetier
FLMetiers-class: Class FLMetiers
FLModel-class: Class FLModel for statistical models
FLPar-class: Class FLPar
FLQuant-class: FLQuant class for numerical data
FLQuantPoint-accesors: Method lowq
FLQuantPoint-class: Class FLQuantPoint
FLQuants-class: Class FLQuants
FLQuantSums: Methods to compute sums, means and vars of FLQuant objects
FLQuantTotals: Method quantTotals
FLSR-class: Class FLSR
FLStock-class: Class FLStock
FLStocks-class: Class FLStocks
FLtest: FLtest functions for running simple units tests
fmle: Method fmle
harvest: Harvest calculations for FLBiol
IOfunctions: Input/Output of FLR objects
is.FL: Methods to determine the class of a given object
iter: Select or modify iterations of an FLR object
iters: Method iters
jacknife: Jacknife resampling
lapply: Method lapply
lattice: Lattice plots
leslie: Method for calculating Leslie matrix dynamics of an FLBiol...
limits: Methods upper and lower
lowess: Method lowess
mcf: Method mcf
mean: Method mean
mean.lifespan: Method for calculating mean lifespan, given the natural...
median: Method median
mergeFL: Merging FLStock objects
metier: Method metier
model.frame: Method model.frame
names: Method names
nls: Method nls
plot: Method plot
predict: Method predict
print: Method print
propagate: Extend an FLQuant along the iter dimension
pv: Population variability
qapply: Method qapply
quant: Method quant
quantile: Method quantile
r: Intrinsic rate of increase from an FLBiol object
range: Method range
revenue: Method revenue
rgamma: Method rgamma
rlnorm: Method rlnorm
rnorm: Method rnorm
rpois: Method rpois
sd: Standard deviation of an FLModel object
setPlusGroup: Method setPlusGroup
show: Method show
sop: Calculates the sum of products correction
splom: Method splom
spr0: Method spr0
sr: Stock-recruitment model function
SRModelName: Convenience function to identify an SR model by its formula
SRModels: Stock-Recruitment models
ssb: Method ssb
ssbpurec: Method ssbpurec
ssn: Method ssn
summary: Method summary
survprob: Calculating survival probabilties given mortality in the...
sweep: Sweep out FLQuant Summaries
transform: Transform elements of a complex FLR object
trim: Trim FLR objects using named dimensions
units: units attribute for FLQuant objects
update: Method update
var: Variance of an FLPar
window: Extract time (year) windows of an FLR object

Functions

$<-,FLlst,character-method Man page
+,FLStock,FLStock-method Man page
AIC,FLModel,missing-method Man page
AIC,FLModel,numeric-method Man page
Arith,FLArray,FLArray-method Man page
Arith,FLArray,numeric-method Man page
Arith,FLCohort,FLCohort-method Man page
Arith,FLQuant,FLQuant-method Man page
Arith,FLQuants,FLQuants-method Man page
Arith,numeric,FLArray-method Man page
BIC,FLModel-method Man page
Bevholt.SV Man page
Extract-FLCore Man page
FLArray Man page
FLArray-class Man page
FLBiol Man page
FLBiol,FLQuant-method Man page
FLBiol,missing-method Man page
FLBiol-class Man page
FLBiol-methods Man page
FLBiols Man page Man page
FLBiols,ANY-method Man page
FLBiols,list-method Man page
FLBiols,missing-method Man page
FLBiols-class Man page
FLBiols-methods Man page
FLCatch Man page
FLCatch,FLQuant-method Man page
FLCatch,missing-method Man page
FLCatch-accesors Man page
FLCatch-class Man page
FLCatch-methods Man page
FLCatches Man page
FLCatches,ANY-method Man page
FLCatches,list-method Man page
FLCatches,missing-method Man page
FLCatches-class Man page
FLCatches-methods Man page
FLCohort Man page
FLCohort,FLCohort-method Man page
FLCohort,FLQuant-method Man page
FLCohort,array-method Man page
FLCohort,missing-method Man page
FLCohort-class Man page
FLCohort-methods Man page
FLCohorts Man page
FLCohorts,ANY-method Man page
FLCohorts,FLCohorts-method Man page
FLCohorts,list-method Man page
FLCohorts,missing-method Man page
FLCohorts-class Man page
FLCohorts-methods Man page
FLComp Man page
FLComp-class Man page
FLCore Man page
FLCore-package Man page
FLFleet Man page
FLFleet,FLCatch-method Man page
FLFleet,FLCatches-method Man page
FLFleet,FLFleet-method Man page
FLFleet,FLMetier-method Man page
FLFleet,FLMetiers-method Man page
FLFleet,FLQuant-method Man page
FLFleet,missing-method Man page
FLFleet-class Man page
FLFleet-methods Man page
FLFleets Man page
FLFleets,ANY-method Man page
FLFleets,list-method Man page
FLFleets,missing-method Man page
FLFleets-class Man page
FLFleets-methods Man page
FLIndex Man page
FLIndex,FLQuant-method Man page
FLIndex,missing-method Man page
FLIndex-class Man page
FLIndex-methods Man page
FLIndices Man page
FLIndices,ANY-method Man page
FLIndices,list-method Man page
FLIndices,missing-method Man page
FLIndices-class Man page
FLIndices-methods Man page
FLMetier Man page
FLMetier,FLCatch-method Man page
FLMetier,FLCatches-method Man page
FLMetier,FLQuant-method Man page
FLMetier,missing-method Man page
FLMetier-class Man page
FLMetier-methods Man page
FLMetiers Man page
FLMetiers,ANY-method Man page
FLMetiers,list-method Man page
FLMetiers,missing-method Man page
FLMetiers-class Man page
FLMetiers-methods Man page
FLModel Man page
FLModel,character-method Man page
FLModel,formula-method Man page
FLModel,function-method Man page
FLModel,missing-method Man page
FLModel-class Man page
FLModel-methods Man page
FLPar Man page
FLPar,FLPar-method Man page
FLPar,array-method Man page
FLPar,missing-method Man page
FLPar,vector-method Man page
FLPar-class Man page
FLPar-methods Man page
FLQuant Man page
FLQuant,FLQuant-method Man page
FLQuant,array-method Man page
FLQuant,matrix-method Man page
FLQuant,missing-method Man page
FLQuant,vector-method Man page
FLQuant-class Man page
FLQuant-methods Man page
FLQuantPoint Man page
FLQuantPoint,FLQuant-method Man page
FLQuantPoint-accesors Man page
FLQuantPoint-class Man page
FLQuantPoint-methods Man page
FLQuants Man page
FLQuants,ANY-method Man page
FLQuants,FLQuants-method Man page
FLQuants,list-method Man page
FLQuants,missing-method Man page
FLQuants-class Man page
FLQuants-methods Man page
FLSR Man page
FLSR,ANY-method Man page
FLSR,missing-method Man page
FLSR-class Man page
FLSR-methods Man page
FLStock Man page
FLStock,FLQuant-method Man page
FLStock,missing-method Man page
FLStock-class Man page
FLStock-methods Man page
FLStocks Man page
FLStocks,ANY-method Man page
FLStocks,list-method Man page
FLStocks,missing-method Man page
FLStocks-class Man page
FLStocks-methods Man page
FLlst Man page
FLlst,ANY-method Man page
FLlst,list-method Man page
FLlst,missing-method Man page
FLlst-class Man page
FLlst-methods Man page
FLtest Man page
Ricker.SV Man page
SRModelName Man page Source code
SRModels Man page
SRNameCode Source code
[,FLArray,ANY,ANY-method Man page
[,FLArray,array,ANY-method Man page
[,FLCatch,ANY,ANY-method Man page
[,FLCohort,ANY,ANY-method Man page
[,FLComp,ANY,ANY-method Man page
[,FLFleet,ANY,ANY-method Man page
[,FLFleet,ANY,missing-method Man page
[,FLIndex,ANY,ANY-method Man page
[,FLMetier,ANY,missing-method Man page
[,FLPar,ANY,ANY-method Man page
[,FLStock,ANY,ANY-method Man page
[,FLlst,ANY,missing-method Man page
[<-,FLArray,ANY,ANY,ANY-method Man page
[<-,FLCatch,ANY,ANY,FLCatch-method Man page
[<-,FLComp,ANY,ANY,ANY-method Man page
[<-,FLPar,ANY,ANY,ANY-method Man page
[<-,FLStock,ANY,ANY,FLStock-method Man page
[<-,FLlst,ANY,missing,ANY-method Man page
[[,FLFleet,ANY,missing-method Man page
[[,FLMetier,ANY,missing-method Man page
[[<-,FLlst,ANY,missing-method Man page
ab2sv Man page
abModel Source code
abPars Source code
ac Man page Source code
an Source code
apply,ANY,missing,missing-method Man page
apply,FLQuant,numeric,function-method Man page
areaMeans Man page
areaMeans,FLQuant-method Man page
areaMeans-methods Man page
areaSums Man page
areaSums,FLQuant-method Man page
areaSums-methods Man page
areaVars Man page
areaVars,FLQuant-method Man page
areaVars-methods Man page
as.FLBiol Man page
as.FLBiol,FLBiol-method Man page
as.FLBiol,FLStock-method Man page
as.FLBiol-methods Man page
as.FLIndex Man page
as.FLIndex,FLFleet-method Man page
as.FLIndex-methods Man page
as.FLQuant Man page
as.FLQuant,FLQuant-method Man page
as.FLQuant,array-method Man page
as.FLQuant,data.frame-method Man page
as.FLQuant,matrix-method Man page
as.FLQuant,vector-method Man page
as.FLQuant-methods Man page
as.FLSR Man page
as.FLSR,FLBiol-method Man page
as.FLSR,FLStock-method Man page
as.FLSR-methods Man page
as.FLStock Man page
as.data.frame,FLArray,missing,missing-method Man page
as.data.frame,FLCatch,missing,missing-method Man page
as.data.frame,FLCohort,ANY,ANY-method Man page
as.data.frame,FLCohort,missing,missing-method Man page
as.data.frame,FLCohorts,missing,missing-method Man page
as.data.frame,FLComp,missing,missing-method Man page
as.data.frame,FLFleet,missing,missing-method Man page
as.data.frame,FLPar,ANY,ANY-method Man page
as.data.frame,FLQuant,missing,missing-method Man page
as.data.frame,FLQuants,missing,missing-method Man page
as.data.frame-FLCore Man page
barchart,formula,FLComp-method Man page
barchart,formula,FLQuant-method Man page
bevholt Man page Source code
bevholt.ar1 Man page
bevholt.c.a Man page
bevholt.c.b Man page
bevholt.d Man page
bevholt.ndc Man page
bevholt.sv Man page
bevholtAR1 Source code
bevholtSV Source code
bkey Man page
bkey,list-method Man page
bkey-methods Man page
bt4 Man page
bubbles Man page
bubbles,formula,FLCohort-method Man page
bubbles,formula,FLQuant-method Man page
bubbles,formula,FLQuants-method Man page
bubbles,formula,data.frame-method Man page
bubbles-methods Man page
bwplot,formula,FLComp-method Man page
bwplot,formula,FLQuant-method Man page
calc.pg Source code
capacity Man page
capacity,FLFleet-method Man page
capacity-methods Man page
capacity<- Man page
capacity<-,FLFleet,FLQuant-method Man page
capacity<-,FLFleet,numeric-method Man page
capacity<--methods Man page
catch Man page
catch,FLCatch-method Man page
catch,FLCatches-method Man page
catch,FLFleet-method Man page
catch,FLMetier-method Man page
catch,FLMetiers-method Man page
catch,FLStock-method Man page
catch-methods Man page
catch.n Man page
catch.n,FLBiol-method Man page
catch.n,FLCatch-method Man page
catch.n,FLCatches-method Man page
catch.n,FLFleet-method Man page
catch.n,FLIndex-method Man page
catch.n,FLMetier-method Man page
catch.n,FLMetiers-method Man page
catch.n,FLStock-method Man page
catch.n-methods Man page
catch.n<- Man page
catch.n<-,FLCatch,FLQuant-method Man page
catch.n<-,FLCatches,FLQuant-method Man page
catch.n<-,FLFleet,FLQuant-method Man page
catch.n<-,FLIndex,FLQuant-method Man page
catch.n<-,FLIndex,numeric-method Man page
catch.n<-,FLMetier,FLQuant-method Man page
catch.n<-,FLMetiers,FLQuant-method Man page
catch.n<-,FLStock,FLQuant-method Man page
catch.n<-,FLStock,numeric-method Man page
catch.n<--methods Man page
catch.q Man page
catch.q,FLCatch-method Man page
catch.q,FLCatches-method Man page
catch.q,FLFleet-method Man page
catch.q,FLMetier-method Man page
catch.q,FLMetiers-method Man page
catch.q-methods Man page
catch.q<- Man page
catch.q<-,FLCatch,FLQuant-method Man page
catch.q<-,FLCatches,FLQuant-method Man page
catch.q<-,FLFleet,FLQuant-method Man page
catch.q<-,FLMetier,FLQuant-method Man page
catch.q<-,FLMetiers,FLQuant-method Man page
catch.q<--methods Man page
catch.sel Man page
catch.sel,FLCatch-method Man page
catch.sel,FLCatches-method Man page
catch.sel,FLFleet-method Man page
catch.sel,FLMetier-method Man page
catch.sel,FLMetiers-method Man page
catch.sel-methods Man page
catch.sel<- Man page
catch.sel<-,FLCatch,FLQuant-method Man page
catch.sel<-,FLCatches,FLQuant-method Man page
catch.sel<-,FLFleet,FLQuant-method Man page
catch.sel<-,FLMetier,FLQuant-method Man page
catch.sel<-,FLMetiers,FLQuant-method Man page
catch.sel<--methods Man page
catch.wt Man page
catch.wt,FLCatch-method Man page
catch.wt,FLCatches-method Man page
catch.wt,FLFleet-method Man page
catch.wt,FLIndex-method Man page
catch.wt,FLMetier-method Man page
catch.wt,FLMetiers-method Man page
catch.wt,FLStock-method Man page
catch.wt-methods Man page
catch.wt<- Man page
catch.wt<-,FLCatch,FLQuant-method Man page
catch.wt<-,FLCatches,FLQuant-method Man page
catch.wt<-,FLFleet,FLQuant-method Man page
catch.wt<-,FLIndex,FLQuant-method Man page
catch.wt<-,FLIndex,numeric-method Man page
catch.wt<-,FLMetier,FLQuant-method Man page
catch.wt<-,FLMetiers,FLQuant-method Man page
catch.wt<-,FLStock,FLQuant-method Man page
catch.wt<-,FLStock,numeric-method Man page
catch.wt<--methods Man page
catch<- Man page
catch<-,FLCatch,FLQuant-method Man page
catch<-,FLCatches,FLQuant-method Man page
catch<-,FLFleet,FLQuant-method Man page
catch<-,FLMetier,FLQuant-method Man page
catch<-,FLMetiers,FLQuant-method Man page
catch<-,FLStock,FLQuant-method Man page
catch<-,FLStock,FLQuants-method Man page
catch<-,FLStock,numeric-method Man page
catch<--methods Man page
catchNames Man page
catchNames,FLCatch-method Man page
catchNames,FLCatches-method Man page
catchNames,FLFleet-method Man page
catchNames,FLFleets-method Man page
catchNames,FLMetier-method Man page
catchNames,FLMetiers-method Man page
catchNames-methods Man page
catches Man page
catches,FLFleet-method Man page
catches,FLMetier-method Man page
catches,FLMetiers-method Man page
catches-methods Man page
catches<- Man page
catches<-,FLMetier,ANY,FLCatch-method Man page
catches<-,FLMetier,ANY,FLCatches-method Man page
catches<--methods Man page
ccplot Man page
ccplot,formula,FLCohort-method Man page
ccplot-methods Man page
checkEqual Man page Source code
checkFail Man page Source code
checkFalse Man page Source code
checkIdentical Man page Source code
checkIndex Source code
checkRun Man page Source code
checkTrue Man page Source code
coerce,FLArray,data.frame-method Man page
coerce,FLBiol,FLIndex-method Man page
coerce,FLBiol,FLStock-method Man page
coerce,FLCatch,FLIndex-method Man page
coerce,FLCatch,FLMetier-method Man page
coerce,FLCatch,FLMetiers-method Man page
coerce,FLCatch,FLStock-method Man page
coerce,FLCohort,FLQuant-method Man page
coerce,FLComp,FLQuants-method Man page
coerce,FLPar,FLQuant-method Man page
coerce,FLPar,list-method Man page
coerce,FLPar,numeric-method Man page
coerce,FLQuant,FLCohort-method Man page
coerce,FLQuant,FLPar-method Man page
coerce,FLStock,FLBiol-method Man page
coerce,FLStock,FLCatch-method Man page
coerce,FLStock,FLFleet-method Man page
coerce,FLStock,FLIndex-method Man page
coerce,FLStock,FLMetier-method Man page
coerce,FLlst,list-method Man page
coerce,NULL,FLBiol-method Man page
coerce,NULL,FLCatch-method Man page
coerce,NULL,FLFleet-method Man page
coerce,NULL,FLIndex-method Man page
coerce,NULL,FLQuant-method Man page
coerce,NULL,FLStock-method Man page
coerce,data.frame,FLComp-method Man page
coerce,data.frame,FLIndex-method Man page
coerce,data.frame,FLQuant-method Man page
coerce,data.frame,FLStock-method Man page
computeCatch Man page
computeCatch,FLCatch-method Man page
computeCatch,FLFleet-method Man page
computeCatch,FLIndex-method Man page
computeCatch,FLMetier-method Man page
computeCatch,FLStock-method Man page
computeCatch-methods Man page
computeDiscards Man page
computeDiscards,FLCatch-method Man page
computeDiscards,FLFleet-method Man page
computeDiscards,FLMetier-method Man page
computeDiscards,FLStock-method Man page
computeDiscards-methods Man page
computeLandings Man page
computeLandings,FLCatch-method Man page
computeLandings,FLFleet-method Man page
computeLandings,FLMetier-method Man page
computeLandings,FLStock-method Man page
computeLandings-methods Man page
computeStock Man page
computeStock,FLBiol-method Man page
computeStock,FLCatch-method Man page
computeStock,FLStock-method Man page
computeStock-methods Man page
condNms Source code
convert6d Man page
convertFLPar Man page
convertFLPar,FLModel-method Man page
convertFLPar,FLPar-method Man page
convertFLPar-methods Man page
cor2cov Source code
covar Man page
covar,FLSR-method Man page
covar-methods Man page
covar<- Man page
covar<-,FLSR,FLQuants-method Man page
covar<-,FLSR-method Man page
covar<--methods Man page
createFLAccesors Man page Source code
createFleetAccesors Source code
crewshare Man page
crewshare,FLFleet-method Man page
crewshare-methods Man page
crewshare<- Man page
crewshare<-,FLFleet,FLQuant-method Man page
crewshare<-,FLFleet,numeric-method Man page
crewshare<--methods Man page
cushing Source code
cv Man page
cv,FLModel-method Man page
cv,FLQuant-method Man page
cv-methods Man page
densityplot,formula,FLPar-method Man page
desc Man page
desc,FLBiol-method Man page
desc,FLCatch-method Man page
desc,FLFleet-method Man page
desc,FLIndex-method Man page
desc,FLMetier-method Man page
desc,FLModel-method Man page
desc,FLStock-method Man page
desc-methods Man page
desc<- Man page
desc<-,FLBiol,character-method Man page
desc<-,FLCatch,character-method Man page
desc<-,FLFleet,character-method Man page
desc<-,FLIndex,character-method Man page
desc<-,FLMetier,character-method Man page
desc<-,FLModel,character-method Man page
desc<-,FLStock,character-method Man page
desc<--methods Man page
details Man page
details,FLModel-method Man page
details-methods Man page
details<- Man page
details<-,FLModel,list-method Man page
details<--methods Man page
dimMeans Man page
dimMeans,FLQuant-method Man page
dimMeans-methods Man page
dimSums Man page
dimSums,FLQuant-method Man page
dimSums-methods Man page
dimVars Man page
dimVars,FLQuant-method Man page
dimVars-methods Man page
dimnames<-,ANY,missing-method Man page
dimnames<-,FLQuant,list-method Man page
dimnames<-,FLStock,list-method Man page
dims Man page
dims,FLCohort-method Man page
dims,FLComp-method Man page
dims,FLFleet-method Man page
dims,FLFleets-method Man page
dims,FLIndex-method Man page
dims,FLPar-method Man page
dims,FLQuant-method Man page
dims-methods Man page
discards Man page
discards,FLCatch-method Man page
discards,FLCatches-method Man page
discards,FLFleet-method Man page
discards,FLMetier-method Man page
discards,FLMetiers-method Man page
discards,FLStock-method Man page
discards-methods Man page
discards.n Man page
discards.n,FLCatch-method Man page
discards.n,FLCatches-method Man page
discards.n,FLFleet-method Man page
discards.n,FLIndex-method Man page
discards.n,FLMetier-method Man page
discards.n,FLMetiers-method Man page
discards.n,FLStock-method Man page
discards.n-methods Man page
discards.n<- Man page
discards.n<-,FLCatch,FLQuant-method Man page
discards.n<-,FLCatches,FLQuant-method Man page
discards.n<-,FLFleet,FLQuant-method Man page
discards.n<-,FLIndex,FLQuant-method Man page
discards.n<-,FLMetier,FLQuant-method Man page
discards.n<-,FLMetiers,FLQuant-method Man page
discards.n<-,FLStock,FLQuant-method Man page
discards.n<-,FLStock,numeric-method Man page
discards.n<--methods Man page
discards.q Man page
discards.q,FLCatch-method Man page
discards.q,FLCatches-method Man page
discards.q,FLFleet-method Man page
discards.q,FLMetier-method Man page
discards.q,FLMetiers-method Man page
discards.q-methods Man page
discards.q<- Man page
discards.q<-,FLCatch,FLQuant-method Man page
discards.q<-,FLCatches,FLQuant-method Man page
discards.q<-,FLFleet,FLQuant-method Man page
discards.q<-,FLMetier,FLQuant-method Man page
discards.q<-,FLMetiers,FLQuant-method Man page
discards.q<--methods Man page
discards.sel Man page
discards.sel,FLCatch-method Man page
discards.sel,FLCatches-method Man page
discards.sel,FLFleet-method Man page
discards.sel,FLMetier-method Man page
discards.sel,FLMetiers-method Man page
discards.sel-methods Man page
discards.sel<- Man page
discards.sel<-,FLCatch,FLQuant-method Man page
discards.sel<-,FLCatches,FLQuant-method Man page
discards.sel<-,FLFleet,FLQuant-method Man page
discards.sel<-,FLMetier,FLQuant-method Man page
discards.sel<-,FLMetiers,FLQuant-method Man page
discards.sel<--methods Man page
discards.wt Man page
discards.wt,FLCatch-method Man page
discards.wt,FLCatches-method Man page
discards.wt,FLFleet-method Man page
discards.wt,FLIndex-method Man page
discards.wt,FLMetier-method Man page
discards.wt,FLMetiers-method Man page
discards.wt,FLStock-method Man page
discards.wt-methods Man page
discards.wt<- Man page
discards.wt<-,FLCatch,FLQuant-method Man page
discards.wt<-,FLCatches,FLQuant-method Man page
discards.wt<-,FLFleet,FLQuant-method Man page
discards.wt<-,FLIndex,FLQuant-method Man page
discards.wt<-,FLIndex,numeric-method Man page
discards.wt<-,FLMetier,FLQuant-method Man page
discards.wt<-,FLMetiers,FLQuant-method Man page
discards.wt<-,FLStock,FLQuant-method Man page
discards.wt<-,FLStock,numeric-method Man page
discards.wt<--methods Man page
discards<- Man page
discards<-,FLCatch,FLQuant-method Man page
discards<-,FLCatches,FLQuant-method Man page
discards<-,FLFleet,FLQuant-method Man page
discards<-,FLMetier,FLQuant-method Man page
discards<-,FLMetiers,FLQuant-method Man page
discards<-,FLStock,FLQuant-method Man page
discards<-,FLStock,FLQuants-method Man page
discards<-,FLStock,numeric-method Man page
discards<--methods Man page
dotplot,formula,FLComp-method Man page
dotplot,formula,FLQuant-method Man page
effort Man page
effort,FLFleet,character-method Man page
effort,FLFleet,missing-method Man page
effort,FLIndex,missing-method Man page
effort-methods Man page
effort<- Man page
effort<-,FLFleet,FLQuant-method Man page
effort<-,FLFleet,numeric-method Man page
effort<-,FLIndex,FLQuant-method Man page
effort<-,FLIndex,numeric-method Man page
effort<--methods Man page
effshare Man page
effshare,FLFleet-method Man page
effshare,FLMetier-method Man page
effshare,FLMetiers-method Man page
effshare-methods Man page
effshare<- Man page
effshare<-,FLMetier,FLQuant-method Man page
effshare<-,FLMetier,numeric-method Man page
effshare<--methods Man page
expand Man page
expand,FLArray-method Man page
expand,FLComp-method Man page
expand,FLQuant-method Man page
expand,FLStock-method Man page
expand-methods Man page
expandAgeFLStock Source code
fbar Man page
fbar,FLBiol-method Man page
fbar,FLStock-method Man page
fbar-methods Man page
fcost Man page
fcost,FLFleet-method Man page
fcost-methods Man page
fcost<- Man page
fcost<-,FLFleet,FLQuant-method Man page
fcost<-,FLFleet,numeric-method Man page
fcost<--methods Man page
fec Man page
fec,FLBiol-method Man page
fec-methods Man page
fec<- Man page
fec<-,FLBiol,FLQuant-method Man page
fec<-,FLBiol,numeric-method Man page
fec<--methods Man page
fillFLCdimnames Source code
filldimnames Source code
finishTest Man page Source code
fitted,ANY-method Man page
fitted,FLModel-method Man page
fitted<- Man page
fitted<-,FLModel,FLArray-method Man page
fitted<-,FLModel,numeric-method Man page
fitted<--methods Man page
flc2flq Man page
flc2flq,FLCohort-method Man page
flc2flq-methods Man page
fmle Man page
fmle,ANY,missing-method Man page
fmle,FLModel,ANY-method Man page
fmle,FLModel,FLPar-method Man page
fmle,FLModel-method Man page
gear Man page
gear,ANY-method Man page
gear,FLMetier-method Man page
gear-methods Man page
gear<- Man page
gear<-,FLMetier,character-method Man page
gear<--methods Man page
geomean Man page Source code
getBHSR Source code
getCPUEolist Source code
getColist Source code
getDir Source code
getExt Source code
getFLPar Source code
getFya Source code
getM.age Source code
getNBootRetro Source code
getNyar Source code
getPlural Man page Source code
getSlotNamesClass Source code
getmaturity Source code
getnages Source code
getnfish Source code
getnpd Source code
getnreal Source code
getnreg Source code
getnyr Source code
getoutputparfile Source code
getplotdat0 Source code
getplotdat1 Source code
getplotdat2 Source code
getplotdat4 Source code
getqedlist Source code
getqlist Source code
getrtimes Source code
getselect Source code
getwt.age Source code
gr Man page
gr,FLModel-method Man page
gr-methods Man page
gr<- Man page
gr<-,FLModel,function-method Man page
gr<--methods Man page
harvest Man page
harvest,FLBiol,missing-method Man page
harvest,FLBiol-method Man page
harvest,FLStock,missing-method Man page
harvest-methods Man page
harvest.spwn Man page
harvest.spwn,FLStock-method Man page
harvest.spwn-methods Man page
harvest.spwn<- Man page
harvest.spwn<-,FLStock,FLQuant-method Man page
harvest.spwn<-,FLStock,numeric-method Man page
harvest.spwn<--methods Man page
harvest<- Man page
harvest<-,FLStock,FLQuant-method Man page
harvest<-,FLStock,character-method Man page
harvest<-,FLStock,numeric-method Man page
harvest<--methods Man page
histogram,formula,FLComp-method Man page
histogram,formula,FLPar-method Man page
histogram,formula,FLQuant-method Man page
histogram,formula,FLQuants-method Man page
index Man page
index,FLIndex-method Man page
index-methods Man page
index.q Man page
index.q,FLIndex-method Man page
index.q-methods Man page
index.q<- Man page
index.q<-,FLIndex,FLQuant-method Man page
index.q<-,FLIndex,numeric-method Man page
index.q<--methods Man page
index.var Man page
index.var,FLIndex-method Man page
index.var-methods Man page
index.var<- Man page
index.var<-,FLIndex,FLQuant-method Man page
index.var<-,FLIndex,numeric-method Man page
index.var<--methods Man page
index<- Man page
index<-,FLIndex,FLQuant-method Man page
index<-,FLIndex,numeric-method Man page
index<--methods Man page
initial Man page
initial,FLModel-method Man page
initial-methods Man page
initial<- Man page
initial<-,FLModel,function-method Man page
initial<--methods Man page
is.FLBiol Man page Source code
is.FLBiols Man page
is.FLBiols,ANY-method Man page
is.FLBiols-methods Man page
is.FLCatches Man page
is.FLCatches,ANY-method Man page
is.FLCatches-methods Man page
is.FLFleets Man page
is.FLFleets,ANY-method Man page
is.FLFleets-methods Man page
is.FLIndex Source code
is.FLIndices Man page
is.FLIndices,ANY-method Man page
is.FLIndices-methods Man page
is.FLMetiers Man page
is.FLMetiers,ANY-method Man page
is.FLMetiers-methods Man page
is.FLQuant Man page Source code
is.FLQuants Man page
is.FLQuants,ANY-method Man page
is.FLQuants-methods Man page
is.FLStock Man page Source code
is.FLStocks Man page
is.FLStocks,ANY-method Man page
is.FLStocks-methods Man page
iter Man page
iter,FLArray-method Man page
iter,FLComp-method Man page
iter,FLFleet-method Man page
iter,FLMetier-method Man page
iter,FLModel-method Man page
iter,FLPar-method Man page
iter,FLQuant,ANY-method Man page
iter,FLQuants-method Man page
iter,logLik-method Man page
iter,vector-method Man page
iter-methods Man page
iter<- Man page
iter<-,FLCohort,FLCohort-method Man page
iter<-,FLComp,FLComp-method Man page
iter<-,FLPar,FLPar-method Man page
iter<-,FLPar,numeric-method Man page
iter<-,FLQuant,FLQuant-method Man page
iter<--methods Man page
iterMeans Man page
iterMeans,FLQuant-method Man page
iterMeans-methods Man page
iterVars Man page
iterVars,FLQuant-method Man page
iterVars-methods Man page
iters Man page
iters,FLQuant-method Man page
iters-methods Man page
jacknife Man page
jacknife,FLQuant-method Man page
jacknife-methods Man page
landings Man page
landings,FLCatch-method Man page
landings,FLCatches-method Man page
landings,FLFleet-method Man page
landings,FLMetier-method Man page
landings,FLMetiers-method Man page
landings,FLStock-method Man page
landings-methods Man page
landings.n Man page
landings.n,FLCatch-method Man page
landings.n,FLCatches-method Man page
landings.n,FLFleet-method Man page
landings.n,FLIndex-method Man page
landings.n,FLMetier-method Man page
landings.n,FLMetiers-method Man page
landings.n,FLStock-method Man page
landings.n-methods Man page
landings.n<- Man page
landings.n<-,FLCatch,FLQuant-method Man page
landings.n<-,FLCatches,FLQuant-method Man page
landings.n<-,FLFleet,FLQuant-method Man page
landings.n<-,FLIndex,FLQuant-method Man page
landings.n<-,FLMetier,FLQuant-method Man page
landings.n<-,FLMetiers,FLQuant-method Man page
landings.n<-,FLStock,FLQuant-method Man page
landings.n<-,FLStock,numeric-method Man page
landings.n<--methods Man page
landings.q Man page
landings.q,FLCatch-method Man page
landings.q,FLCatches-method Man page
landings.q,FLFleet-method Man page
landings.q,FLMetier-method Man page
landings.q,FLMetiers-method Man page
landings.q-methods Man page
landings.q<- Man page
landings.q<-,FLCatch,FLQuant-method Man page
landings.q<-,FLCatches,FLQuant-method Man page
landings.q<-,FLFleet,FLQuant-method Man page
landings.q<-,FLMetier,FLQuant-method Man page
landings.q<-,FLMetiers,FLQuant-method Man page
landings.q<--methods Man page
landings.sel Man page
landings.sel,FLCatch-method Man page
landings.sel,FLCatches-method Man page
landings.sel,FLFleet-method Man page
landings.sel,FLMetier-method Man page
landings.sel,FLMetiers-method Man page
landings.sel-methods Man page
landings.sel<- Man page
landings.sel<-,FLCatch,FLQuant-method Man page
landings.sel<-,FLCatches,FLQuant-method Man page
landings.sel<-,FLFleet,FLQuant-method Man page
landings.sel<-,FLMetier,FLQuant-method Man page
landings.sel<-,FLMetiers,FLQuant-method Man page
landings.sel<--methods Man page
landings.wt Man page
landings.wt,FLCatch-method Man page
landings.wt,FLCatches-method Man page
landings.wt,FLFleet-method Man page
landings.wt,FLIndex-method Man page
landings.wt,FLMetier-method Man page
landings.wt,FLMetiers-method Man page
landings.wt,FLStock-method Man page
landings.wt-methods Man page
landings.wt<- Man page
landings.wt<-,FLCatch,FLQuant-method Man page
landings.wt<-,FLCatches,FLQuant-method Man page
landings.wt<-,FLFleet,FLQuant-method Man page
landings.wt<-,FLIndex,FLQuant-method Man page
landings.wt<-,FLMetier,FLQuant-method Man page
landings.wt<-,FLMetiers,FLQuant-method Man page
landings.wt<-,FLStock,FLQuant-method Man page
landings.wt<-,FLStock,numeric-method Man page
landings.wt<--methods Man page
landings<- Man page
landings<-,FLCatch,FLQuant-method Man page
landings<-,FLCatches,FLQuant-method Man page
landings<-,FLFleet,FLQuant-method Man page
landings<-,FLMetier,FLQuant-method Man page
landings<-,FLMetiers,FLQuant-method Man page
landings<-,FLStock,FLQuant-method Man page
landings<-,FLStock,FLQuants-method Man page
landings<-,FLStock,numeric-method Man page
landings<--methods Man page
lapply,FLlst,missing-method Man page
lapply,FLlst-method Man page
lattice-FLCore Man page
leslie Man page
leslie,FLBiol-method Man page
leslie-methods Man page
logLik,ANY-method Man page
logLik,FLModel-method Man page
logLik<- Man page
logLik<-,FLModel,logLik-method Man page
logLik<-,FLModel,numeric-method Man page
logLik<--methods Man page
logl Man page
logl,FLModel-method Man page
logl-methods Man page
logl.ar1 Man page
logl<- Man page
logl<-,FLModel,function-method Man page
logl<--methods Man page
lower Man page
lower,FLModel-method Man page
lower<- Man page
lower<-,FLModel,numeric-method Man page
lowess,FLSR,missing-method Man page
lowq Man page
lowq,FLQuantPoint-method Man page
lowq-methods Man page
lowq<- Man page
lowq<-,FLQuantPoint-method Man page
lowq<--methods Man page
m Man page
m,FLBiol-method Man page
m,FLStock-method Man page
m-methods Man page
m.spwn Man page
m.spwn,FLStock-method Man page
m.spwn-methods Man page
m.spwn<- Man page
m.spwn<-,FLStock,FLQuant-method Man page
m.spwn<-,FLStock,numeric-method Man page
m.spwn<--methods Man page
m<- Man page
m<-,FLBiol,FLQuant-method Man page
m<-,FLBiol,numeric-method Man page
m<-,FLStock,FLQuant-method Man page
m<-,FLStock,numeric-method Man page
m<--methods Man page
mat Man page
mat,FLStock-method Man page
mat-methods Man page
mat<- Man page
mat<-,FLStock,FLQuant-method Man page
mat<-,FLStock,numeric-method Man page
mat<--methods Man page
matchDimnames Source code
mcf Man page
mcf,FLComp-method Man page
mcf,list-method Man page
mcf-methods Man page
mean,FLPar-method Man page
mean,FLQuant-method Man page
mean,FLQuantPoint-method Man page
mean.lifespan Man page
mean.lifespan,FLBiol-method Man page
mean.lifespan-methods Man page
mean<- Man page
mean<-,FLQuantPoint-method Man page
mean<--methods Man page
median,FLPar,missing-method Man page
median,FLPar-method Man page
median,FLQuantPoint,missing-method Man page
median,FLQuantPoint-method Man page
median<- Man page
median<-,FLQuantPoint-method Man page
median<--methods Man page
mergeFLStock Man page Source code
metier Man page
metier,FLFleet,ANY-method Man page
metier,FLFleet-method Man page
metier-methods Man page
metier<- Man page
metier<-,FLFleet,ANY,FLMetier-method Man page
metier<--methods Man page
metiers Man page
metiers,FLFleet-method Man page
metiers-methods Man page
metiers<- Man page
metiers<-,FLFleet,FLMetiers-method Man page
metiers<--methods Man page
model Man page
model,FLModel-method Man page
model-methods Man page
model.frame,FLComp-method Man page
model.frame,FLlst-method Man page
model<- Man page
model<-,FLModel,character-method Man page
model<-,FLModel,formula-method Man page
model<-,FLModel,function-method Man page
model<-,FLModel,list-method Man page
model<--methods Man page
n Man page
n,FLBiol-method Man page
n-methods Man page
n<- Man page
n<-,FLBiol,FLQuant-method Man page
n<-,FLBiol,numeric-method Man page
n<--methods Man page
name Man page
name,FLBiol-method Man page
name,FLCatch-method Man page
name,FLFleet-method Man page
name,FLIndex-method Man page
name,FLMetier-method Man page
name,FLModel-method Man page
name,FLStock-method Man page
name-methods Man page
name<- Man page
name<-,FLBiol,character-method Man page
name<-,FLCatch,character-method Man page
name<-,FLFleet,character-method Man page
name<-,FLIndex,character-method Man page
name<-,FLMetier,character-method Man page
name<-,FLModel,character-method Man page
name<-,FLStock,character-method Man page
name<--methods Man page
names,FLArray-method Man page
names,FLPar-method Man page
names,FLlst-method Man page
names<-,FLPar,character-method Man page
nls,FLModel,missing,missing,missing,missing,missing,missing,miss Man page
nls,FLModel,missing-method Man page
nls-FLCore Man page
nsher Man page
onLoad Source code
pairwiseConsistency Source code
params Man page
params,FLModel-method Man page
params-methods Man page
params<- Man page
params<-,FLModel,FLPar-method Man page
params<--methods Man page
ple4 Man page
ple4.biol Man page
ple4.index Man page
ple4.indices Man page
ple4sex Man page
plot,FLBiol,missing-method Man page
plot,FLCohort,missing-method Man page
plot,FLIndex,missing-method Man page
plot,FLIndices,missing-method Man page
plot,FLPar,missing-method Man page
plot,FLQuant,missing-method Man page
plot,FLQuantPoint,missing-method Man page
plot,FLSR,missing-method Man page
plot,FLStock,missing-method Man page
plot,FLStocks,FLPar-method Man page
plot,FLStocks,missing-method Man page
plotFunc Source code
plotInternalConsistency Source code
plotResidAR1 Source code
plotResidAll Source code
plotResidQQ Source code
plotResidX Source code
plotResidYr Source code
plotinternal Source code
plotts Source code
predict,FLModel-method Man page
price Man page
price,FLCatch-method Man page
price,FLCatches-method Man page
price,FLFleet-method Man page
price,FLMetier-method Man page
price,FLMetiers-method Man page
price-methods Man page
price<- Man page
price<-,FLCatch,FLQuant-method Man page
price<-,FLCatches,FLQuant-method Man page
price<-,FLFleet,FLQuant-method Man page
price<-,FLMetier,FLQuant-method Man page
price<-,FLMetiers,FLQuant-method Man page
price<--methods Man page
print,FLQuant-method Man page
propagate Man page
propagate,FLCohort-method Man page
propagate,FLComp-method Man page
propagate,FLFleet-method Man page
propagate,FLMetier-method Man page
propagate,FLPar-method Man page
propagate,FLQuant-method Man page
propagate-methods Man page
pv Man page
pv,FLQuant-method Man page
pv-methods Man page
qapply Man page
qapply,FLComp,function-method Man page
qapply-methods Man page
quant Man page
quant,FLArray-method Man page
quant-methods Man page
quant<- Man page
quant<-,FLArray,character-method Man page
quant<-,FLArray,missing-method Man page
quant<-,FLArray-method Man page
quant<--methods Man page
quantMeans Man page
quantMeans,FLQuant-method Man page
quantMeans-methods Man page
quantSums Man page
quantSums,FLQuant-method Man page
quantSums-methods Man page
quantTotals Man page
quantTotals,FLQuant-method Man page
quantTotals-methods Man page
quantVars Man page
quantVars,FLQuant-method Man page
quantVars-methods Man page
quantile,FLQuant-method Man page
quantile,FLQuantPoint-method Man page
r Man page
r,FLBiol-method Man page
r-methods Man page
range,FLComp,missing-method Man page
range,FLComp-method Man page
range,FLlst-method Man page
range-methods Man page
range<- Man page
range<-,FLComp-method Man page
range<--methods Man page
read.FLIndex Man page Source code
read.FLIndices Man page Source code
read.FLStock Man page
readADMB Source code
readAdaptFile Source code
readBinary Source code
readCSAFile Source code
readFLIndex Man page Source code
readFLIndices Man page Source code
readFLStock Man page Source code
readIndicesAdapt Source code
readIndicesCSA Source code
readIndicesICA Source code
readIndicesICA.ssb Source code
readIndicesVPA Source code
readPAFile Source code
readVPA Source code
readVPA2Box Source code
readVPAFile Man page Source code
rec Man page
rec,FLBiol-method Man page
rec,FLSR-method Man page
rec,FLStock-method Man page
rec-methods Man page
rec<- Man page
rec<-,FLSR,FLQuant-method Man page
rec<-,FLSR,numeric-method Man page
rec<--methods Man page
residuals,ANY-method Man page
residuals,FLModel-method Man page
residuals<- Man page
residuals<-,FLModel,FLArray-method Man page
residuals<-,FLModel,numeric-method Man page
residuals<--methods Man page
respanel Source code
revenue Man page
revenue,FLCatch-method Man page
revenue,FLCatches-method Man page
revenue,FLFleet-method Man page
revenue,FLMetier-method Man page
revenue,FLMetiers-method Man page
revenue-methods Man page
rgamma,numeric,FLQuantPoint,missing,missing-method Man page
ricker Man page Source code
ricker.ar1 Man page
ricker.c.a Man page
ricker.c.b Man page
ricker.d Man page
ricker.sv Man page
rickerAR1 Source code
rickerCa Source code
rickerSV Source code
rlnorm,numeric,FLQuant,FLQuant-method Man page
rlnorm,numeric,FLQuant,missing-method Man page
rlnorm,numeric,FLQuant,numeric-method Man page
rlnorm,numeric,FLQuantPoint,missing-method Man page
rlnorm,numeric,missing,FLQuant-method Man page
rlnorm,numeric,numeric,FLQuant-method Man page
rnorm,numeric,FLQuant,FLQuant-method Man page
rnorm,numeric,FLQuant,missing-method Man page
rnorm,numeric,FLQuant,numeric-method Man page
rnorm,numeric,FLQuantPoint,missing-method Man page
rnorm,numeric,missing,FLQuant-method Man page
rnorm,numeric,numeric,FLQuant-method Man page
rpois,numeric,FLQuant-method Man page Man page
scanText Source code
scanpipe Source code
sd,FLModel,missing-method Man page
seasonMeans Man page
seasonMeans,FLQuant-method Man page
seasonMeans-methods Man page
seasonSums Man page
seasonSums,FLQuant-method Man page
seasonSums-methods Man page
seasonVars Man page
seasonVars,FLQuant-method Man page
seasonVars-methods Man page
segreg Man page Source code
sel.pattern Man page
sel.pattern,FLIndex-method Man page
sel.pattern-methods Man page
sel.pattern<- Man page
sel.pattern<-,FLIndex,FLQuant-method Man page
sel.pattern<-,FLIndex,numeric-method Man page
sel.pattern<--methods Man page
set.index Source code
setCon Man page Source code
setPlusGroup Man page
setPlusGroup,FLBiol,numeric-method Man page
setPlusGroup,FLCatch,numeric-method Man page
setPlusGroup,FLQuant,numeric-method Man page
setPlusGroup,FLStock,numeric-method Man page
setPlusGroup-methods Man page
shepherd Man page Source code
shepherd.ar1 Man page
shepherd.d Man page
shepherd.d.ar1 Man page
shepherd.ndc Man page
shepherd.ndc.ar1 Man page
shepherdSV Source code
show,FLArray-method Man page
show,FLPar-method Man page
show,FLQuant-method Man page
show,FLQuantPoint-method Man page
show,FLQuants-method Man page
skip.hash Source code
skip.until.hash Source code
sop Man page Source code
splom,FLPar,missing-method Man page
spp Man page
spp,FLCatch-method Man page
spp,FLCatches-method Man page
spp,FLFleet-method Man page
spp,FLFleets-method Man page
spp,FLMetier-method Man page
spp,FLMetiers-method Man page
spp-methods Man page
spp<-,FLCatch,character-method Man page
spp<--methods Man page
spr0 Man page
spr0,FLQuant,FLQuant,FLQuant-method Man page
spr0,FLSR,missing,FLQuant-method Man page
spr0,FLStock,missing,missing-method Man page
spr0-methods Man page
spr2v Source code
spwn Man page
spwn,FLBiol-method Man page
spwn-methods Man page
spwn<- Man page
spwn<-,FLBiol,FLQuant-method Man page
spwn<-,FLBiol,numeric-method Man page
spwn<--methods Man page
sr Man page Source code
srpanel Source code
srr2s Source code
ssb Man page
ssb,FLBiol-method Man page
ssb,FLSR-method Man page
ssb,FLStock-method Man page
ssb-methods Man page
ssb<- Man page
ssb<-,FLSR,FLQuant-method Man page
ssb<-,FLSR,numeric-method Man page
ssb<--methods Man page
ssbpurec Man page
ssbpurec,FLStock-method Man page
ssbpurec-methods Man page
ssn Man page
ssn,FLBiol-method Man page
ssn-methods Man page
startTest Man page Source code
stock Man page
stock,FLStock-method Man page
stock-methods Man page
stock.n Man page
stock.n,FLStock-method Man page
stock.n-methods Man page
stock.n<- Man page
stock.n<-,FLStock,FLQuant-method Man page
stock.n<-,FLStock,numeric-method Man page
stock.n<--methods Man page
stock.wt Man page
stock.wt,FLStock-method Man page
stock.wt-methods Man page
stock.wt<- Man page
stock.wt<-,FLStock,FLQuant-method Man page
stock.wt<-,FLStock,numeric-method Man page
stock.wt<--methods Man page
stock<- Man page
stock<-,FLStock,FLQuant-method Man page
stock<-,FLStock,numeric-method Man page
stock<--methods Man page
stripplot,formula,FLComp-method Man page
stripplot,formula,FLQuant-method Man page
summary,FLArray-method Man page
summary,FLComp-method Man page
summary,FLFleet-method Man page
summary,FLMetier-method Man page
summary,FLModel-method Man page
summary,FLPar-method Man page
summary,FLQuant-method Man page
summary,FLQuantPoint-method Man page
summary,FLQuants-method Man page
summary,FLlst-method Man page
survprob Man page
survprob,FLBiol-method Man page
survprob-methods Man page
sv2ab Man page
svModel Source code
svPars Source code
sweep,FLArray-method Man page
sweep,FLQuant-method Man page
tagTest Man page Source code
transform,FLComp-method Man page
trim Man page
trim,FLArray-method Man page
trim,FLCatch-method Man page
trim,FLCohort-method Man page
trim,FLComp-method Man page
trim,FLFleet-method Man page
trim,FLIndex-method Man page
trim,FLMetier-method Man page
trim,FLQuant-method Man page
trim,FLStock-method Man page
trim-methods Man page
type Man page
type,FLIndex-method Man page
type-methods Man page
type<- Man page
type<-,FLIndex,character-method Man page
type<--methods Man page
unitMeans Man page
unitMeans,FLQuant-method Man page
unitMeans-methods Man page
unitSums Man page
unitSums,FLQuant-method Man page
unitSums-methods Man page
unitVars Man page
unitVars,FLQuant-method Man page
unitVars-methods Man page
units,FLArray-method Man page
units,FLCohort-method Man page
units,FLComp-method Man page
units,FLPar-method Man page
units<-,FLArray,character-method Man page
units<-,FLCohort,character-method Man page
units<-,FLComp,list-method Man page
units<-,FLPar,character-method Man page
update,FLModel-method Man page
upper Man page
upper,FLModel-method Man page
upper<- Man page
upper<-,FLModel,numeric-method Man page
uppq Man page
uppq,FLQuantPoint-method Man page
uppq-methods Man page
uppq<- Man page
uppq<-,FLQuantPoint-method Man page
uppq<--methods Man page
vFLCs Source code
vFLPs Source code
vFLQs Source code Source code
vFLSs Source code Source code Source code Source code Source code Source code
vFLl Source code
validFLArray Source code
validFLBiol Source code
validFLCatch Source code
validFLCohort Source code
validFLComp Source code
validFLFleet Source code
validFLIndex Source code
validFLMetier Source code
validFLModel Source code
validFLPar Source code
validFLQuant Source code
validFLQuantPoint Source code
validFLSR Source code
validFLStock Source code
var,FLPar,missing,missing,missing-method Man page
var,FLPar-method Man page
var,FLQuantPoint,missing,missing,missing-method Man page
var,FLQuantPoint-method Man page
var<- Man page
var<-,FLQuantPoint-method Man page
var<--methods Man page
vcost Man page
vcost,FLFleet-method Man page
vcost,FLMetier-method Man page
vcost,FLMetiers-method Man page
vcost-methods Man page
vcost<- Man page
vcost<-,FLMetier,FLQuant-method Man page
vcost<-,FLMetier,numeric-method Man page
vcost<--methods Man page
vcov,ANY-method Man page
vcov,FLModel-method Man page
vcov<- Man page
vcov<-,FLModel,array-method Man page
vcov<--methods Man page
vpa2BoxFiles Source code
window,FLComp-method Man page
window,FLFleet-method Man page
window,FLQuant-method Man page
window,FLlst-method Man page
writeADMB Source code
writeFLStock Man page Source code
writeIndicesICA Source code
writeIndicesVPA Source code
writeVPA Source code
wt Man page
wt,FLBiol-method Man page
wt-methods Man page
wt<- Man page
wt<-,FLBiol,FLQuant-method Man page
wt<-,FLBiol,numeric-method Man page
wt<--methods Man page
xyplot,formula,FLCohort-method Man page
xyplot,formula,FLComp-method Man page
xyplot,formula,FLQuant-method Man page
xyplot,formula,FLQuants-method Man page
yearMeans Man page
yearMeans,FLQuant-method Man page
yearMeans-methods Man page
yearSums Man page
yearSums,FLQuant-method Man page
yearSums-methods Man page
yearTotals Man page
yearTotals,FLQuant-method Man page
yearTotals-methods Man page
yearVars Man page
yearVars,FLQuant-method Man page
yearVars-methods Man page

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/FLAccesors.R
R/FLArray.R
R/FLBiol.R
R/FLCatch.R
R/FLCohort.R
R/FLComp.R
R/FLFleet.R
R/FLGrowth.R
R/FLIndex.R
R/FLMetier.R
R/FLModel.R
R/FLModelDeriv.R
R/FLPar.R
R/FLQuant.R
R/FLQuantJK.R
R/FLQuantPoint.R
R/FLQuants.R
R/FLSR.R
R/FLStock.R
R/FLlst-class.R
R/FLlst-methods.R
R/FLtest.R
R/PlotDiagnostics.R
R/SRmodels.R
R/classesArr.R
R/classesComp.R
R/coerce.R
R/genericMethods.R
R/io.ADMB.R
R/io.Adapt.R
R/io.FLIndices.R
R/io.FLStock.R
R/io.MFCL.R
R/io.VPA2Box.R
R/io.VPAsuite.R
R/operators.R
R/zzz.R
data
data/bt4.RData
data/datalist
data/nsher.RData
data/ple4.RData
data/ple4.biol.RData
data/ple4.index.RData
data/ple4.indices.RData
data/ple4sex.RData
demo
demo/00Index
demo/FLFleet.R
demo/FLSR.R
inst
inst/CITATION
inst/include
inst/include/FLCoreClasses.hpp
man
man/AIC.Rd
man/Arith.Rd
man/BIC.Rd
man/Extract.Rd
man/FLArray-class.Rd
man/FLBiol-class.Rd
man/FLBiols-class.Rd
man/FLCatch-accessors.Rd
man/FLCatch-class.Rd
man/FLCatches-class.Rd
man/FLCohort-class.Rd
man/FLCohorts-class.Rd
man/FLComp-class.Rd
man/FLCore-accesors.Rd
man/FLCore-internal.Rd
man/FLCore-package.Rd
man/FLFleet-class.Rd
man/FLFleets-class.Rd
man/FLIndex-class.Rd
man/FLIndices-class.Rd
man/FLMetier-class.Rd
man/FLMetiers-class.Rd
man/FLModel-class.Rd
man/FLPar-class.Rd
man/FLQuant-class.Rd
man/FLQuantPoint-accesors.Rd
man/FLQuantPoint-class.Rd
man/FLQuantSums.Rd
man/FLQuantTotals.Rd
man/FLQuants-class.Rd
man/FLSR-class.Rd
man/FLStock-class.Rd
man/FLStocks-class.Rd
man/FLlst-class.Rd
man/FLtest.Rd
man/IOfunctions.Rd
man/SRModelName.Rd
man/SRModels.Rd
man/apply.Rd
man/as.data.frame.Rd
man/asOld.Rd
man/bkey.Rd
man/bubbles.Rd
man/catchNames.Rd
man/ccplot.Rd
man/coerce.Rd
man/computeCatch.Rd
man/createFLAccesors.Rd
man/cv.Rd
man/data.Rd
man/dimnames.Rd
man/dims.Rd
man/expand.Rd
man/fbar.Rd
man/flc2flq.Rd
man/fmle.Rd
man/harvest.Rd
man/is.FL.Rd
man/iter.Rd
man/iters.Rd
man/jacknife.Rd
man/lapply.Rd
man/lattice.Rd
man/leslie.Rd
man/limits.Rd
man/lowess.Rd
man/mcf.Rd
man/mean.Rd
man/mean.lifespan.Rd
man/median.Rd
man/mergeFL.Rd
man/metier.Rd
man/model.frame.Rd
man/names.Rd
man/nls.Rd
man/plot.Rd
man/predict.Rd
man/print.Rd
man/propagate.Rd
man/pv.Rd
man/qapply.Rd
man/quant.Rd
man/quantile.Rd
man/r.Rd
man/range.Rd
man/revenue.Rd
man/rgamma.Rd
man/rlnorm.Rd
man/rnorm.Rd
man/rpois.Rd
man/sd.Rd
man/setPlusGroup.Rd
man/show.Rd
man/sop.Rd
man/splom.Rd
man/spr0.Rd
man/sr.Rd
man/ssb.Rd
man/ssbpurec.Rd
man/ssn.Rd
man/summary.Rd
man/survprob.Rd
man/sweep.Rd
man/transform.Rd
man/trim.Rd
man/units.Rd
man/update.Rd
man/var.Rd
man/window.Rd
src
src/FLCoreClasses.cpp
src/Makevars
src/Makevars.win
tests
tests/FLCohort.R
tests/FLComp.R
tests/FLFleet.R
tests/FLModelProfile.R
tests/FLPar.R
tests/FLQuant.R
tests/FLQuants.R
tests/FLStock.R
tests/FLlst.R
FLCore documentation built on May 21, 2017, 1:38 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.