GSEArot: GSEA rotation
Version 0.9

Functions for performing Gene Set Enrichment Analysis (GSEA) with rotation testing.

Browse man pages Browse package API and functions Browse package files

AuthorGuro Dorum
Date of publication2014-07-02 11:21:29
MaintainerGuro Dorum <guro.dorum@umb.no>
LicenseGPL
Version0.9
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("GSEArot", repos="http://R-Forge.R-project.org")

Man pages

es: Enrichment score
fdr: False discovery rate computation for GSEA.
gsea.rotation: GSEA with rotation test
GSEArot-package: Gene Set Enrichment Analysis with rotation testing
QR: QR-decomposition
rotation: Rotations
significance: Significance level computation in GSEA
t.90th: Computes moderated gene wise t-statistics.

Functions

GSEArot Man page
GSEArot-package Man page
QR Man page Source code
es Man page Source code
fdr Man page Source code
gsea.rotation Man page Source code
householder Source code
rotation Man page Source code
significance Man page Source code
t.90th Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/GSEArot-internal.R
R/QR.R
R/es.R
R/fdr.R
R/gsea.rotation.R
R/rotation.R
R/significance.R
R/t.90th.R
man
man/GSEArot-package.Rd
man/QR.Rd
man/es.Rd
man/fdr.Rd
man/gsea.rotation.Rd
man/rotation.Rd
man/significance.Rd
man/t.90th.Rd
GSEArot documentation built on May 21, 2017, 12:53 a.m.