IBDLabels: Convert Between Different IBD-State Labelling Schemes.
Version 1.1

Convert "label", "lexicographic", "jacquard" and "vec", full state description vector. All conversions are done to and from "label", as used in IBD_Haplo. More information regarding IBD_Haplo can be found at http://www.stat.washington.edu/thompson/Genepi/pangaea.shtml.

AuthorFiona Grimson
Date of publication2015-02-14 01:16:14
MaintainerFiona Grimson <fgrimson@uw.edu>
LicenseGPL-3
Version1.1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("IBDLabels", repos="http://R-Forge.R-project.org")

Popular man pages

allJaq: Jacquard ordering
allLex: Lexicographic ordering
allStates: Conversion Table for all labelling schemes
allVec: IBD state vectors
anRpackage-package: Convert between different IBD-state labelling schemes
maxlabel: Maximum Label for given number gametes
See all...

All man pages Function index File listing

Man pages

allJaq: Jacquard ordering
allLex: Lexicographic ordering
allStates: Conversion Table for all labelling schemes
allVec: IBD state vectors
anRpackage-package: Convert between different IBD-state labelling schemes
maxlabel: Maximum Label for given number gametes

Functions

IBDLabel Man page
IBDLabel-package Man page
allJaq Man page Source code
allLex Man page Source code
allStates Man page Source code
allVec Man page Source code
fgl2vec Man page Source code
jaq2label Man page Source code
label2jaq Man page Source code
label2lex Man page Source code
label2vec Man page Source code
lex2label Man page Source code
maxlabel Man page Source code
vec2label Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/allJaq.R
R/allLex.R
R/allStates.R
R/allVec.R
R/fgl2vec.R
R/jaq2label.R
R/label2jaq.R
R/label2lex.R
R/label2vec.R
R/lex2label.R
R/maxlabel.R
R/vec2label.R
build
build/vignette.rds
inst
inst/doc
inst/doc/IBDLabels_tutorial.R
inst/doc/IBDLabels_tutorial.Rnw
inst/doc/IBDLabels_tutorial.pdf
man
man/allJaq.Rd
man/allLex.Rd
man/allStates.Rd
man/allVec.Rd
man/anRpackage-package.Rd
man/maxlabel.Rd
vignettes
vignettes/IBDLabels_tutorial.Rnw
vignettes/states
vignettes/states/ibdstates.svg
vignettes/states/s1.png
vignettes/states/s10.png
vignettes/states/s11.png
vignettes/states/s12.png
vignettes/states/s13.png
vignettes/states/s14.png
vignettes/states/s15.png
vignettes/states/s2.png
vignettes/states/s3.png
vignettes/states/s4.png
vignettes/states/s5.png
vignettes/states/s6.png
vignettes/states/s7.png
vignettes/states/s8.png
vignettes/states/s9.png
IBDLabels documentation built on May 21, 2017, 3:31 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

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