Files in LDExplorer

Efficient Whole-Genome LD Based Haplotpe Block Recognition

COPYING

DESCRIPTION

NAMESPACE

inst/doc/HapMapII_r22_CEU_chr20_31767872_33700401.legend.txt.gz

inst/doc/HapMapII_r22_CEU_chr20_31767872_33700401.phase.gz

inst/doc/1000G_phase1_v3_20101123_CEU_chr2_89153688_89307566.vcf.gz

R/CREATE_BROWSER_TRACK.R R/LD.R R/MIG_RSQ.R R/MIG_MULTI_CHR.R R/MIG_MULTI_REGIONS.R R/MIG.R

src/Makevars.win

src/LDExplorer.cpp

src/LDExplorer.h

src/Makevars

src/db/Makefile

src/db/Unique.cpp

src/db/Db.cpp

src/db/DbView.cpp

src/db/include/Db.h

src/db/include/DbView.h

src/db/include/Unique.h

src/zlib/deflate.c

src/zlib/inflate.h

src/zlib/zutil.c

src/zlib/zutil.h

src/zlib/gzlib.c

src/zlib/gzwrite.c

src/zlib/inflate.c

src/zlib/Makefile

src/zlib/crc32.c

src/zlib/inftrees.c

src/zlib/deflate.h

src/zlib/zlib.h

src/zlib/zconf.h

src/zlib/adler32.c

src/zlib/uncompr.c

src/zlib/gzread.c

src/zlib/compress.c

src/zlib/gzguts.h

src/zlib/gzclose.c

src/zlib/crc32.h

src/zlib/trees.h

src/zlib/trees.c

src/zlib/inffast.h

src/zlib/inftrees.h

src/zlib/infback.c

src/zlib/inffast.c

src/zlib/inffixed.h

src/auxiliary/Makefile

src/auxiliary/auxiliary.cpp

src/auxiliary/include/auxiliary.h

src/reader/Makefile

src/reader/ReaderFactory.cpp

src/reader/TextReader.cpp

src/reader/Reader.cpp

src/reader/GzipReader.cpp

src/reader/include/Reader.h

src/reader/include/ReaderFactory.h

src/reader/include/TextReader.h

src/reader/include/GzipReader.h

src/algorithms/Makefile

src/algorithms/CI.cpp

src/algorithms/LD.cpp

src/algorithms/CIWP.cpp

src/algorithms/AlgorithmFactory.cpp

src/algorithms/AlgorithmMIGP.cpp

src/algorithms/CIFactory.cpp

src/algorithms/AlgorithmMIGPP.cpp

src/algorithms/Partition.cpp

src/algorithms/Algorithm.cpp

src/algorithms/CIAV.cpp

src/algorithms/AlgorithmMIG.cpp

src/algorithms/include/CIAV.h

src/algorithms/include/AlgorithmMIGPP.h

src/algorithms/include/AlgorithmMIGP.h

src/algorithms/include/AlgorithmMIG.h

src/algorithms/include/Algorithm.h

src/algorithms/include/Partition.h

src/algorithms/include/AlgorithmFactory.h

src/algorithms/include/LD.h

src/algorithms/include/CIFactory.h

src/algorithms/include/CI.h

src/algorithms/include/CIWP.h

src/exception/Makefile

src/exception/Exception.cpp

src/exception/include/Exception.h

src/writer/Makefile

src/writer/Writer.cpp

src/writer/TextWriter.cpp

src/writer/GzipWriter.cpp

src/writer/WriterFactory.cpp

src/writer/include/WriterFactory.h

src/writer/include/GzipWriter.h

src/writer/include/TextWriter.h

src/writer/include/Writer.h

man/create_browser_track.Rd man/mig.Rd man/mig_multi_regions.Rd man/ld.Rd man/mig_multi_chr.Rd man/mig_rsq.Rd

LDExplorer documentation built on May 2, 2019, 5:54 p.m.