Group-lasso with hierarchical clustering.

Author | Quentin Grimonprez |

Date of publication | 2017-01-14 15:52:04 |

Maintainer | Quentin Grimonprez <quentin.grimonprez@inria.fr> |

License | GPL (>=2) |

Version | 0.4 |

**Chisqtest:** Chi-square test

**coef.cv.MLGL:** Get coefficients from a 'cv.MLGL' object

**coef.MLGL:** Get coefficients from a 'MLGL' object

**cv.MLGL:** Multi-Layer Group-Lasso with cross V-fold validation

**Ftest:** F-test

**fullProcess:** Full process of MLGL

**hierarchicalFDR:** Hierachical testing with FDR control

**hierarchicalFWER:** Hierachical testing with FWER control

**listToMatrix:** Obtain a sparse matrix of the coefficients of the path

**MLGL:** Multi-Layer Group-Lasso

**MLGL-package:** MLGL

**overlapgglasso:** Group-lasso with overlapping groups

**partialChisqtest:** Chi-square F-test

**partialFtest:** Partial F-test

**plot.cv.MLGL:** Plot the cross-validation obtained from 'cv.MLGL' function

**plot.MLGL:** Plot the path obtained from 'MLGL' function

**plot.stability.MLGL:** Plot the stability path obtained from 'stability.MLGL'...

**predict.cv.MLGL:** Predict fitted values from a 'cv.MLGL' object

**predict.MLGL:** Predict fitted values from a 'MLGL' object

**selFDR:** Selection from hierarchical testing with FDR control

**selFWER:** Selection from hierarchical testing with FWER control

**simuBlockGaussian:** Simulate multivariate Gaussian samples with block diagonal...

**stability.MLGL:** Stability Selection for Multi-Layer Group-lasso

**uniqueGroupHclust:** Find all unique groups in 'hclust' results

MLGL/DESCRIPTION

MLGL/NAMESPACE

MLGL/NEWS

MLGL/R

MLGL/R/MLGL-package.R
MLGL/R/MLGL.R
MLGL/R/cv.MLGL.R
MLGL/R/fullProcess.R
MLGL/R/hierarchicalFDR.R
MLGL/R/hierarchicalFWER.R
MLGL/R/hierarchicalTestClassical.R
MLGL/R/overlap.R
MLGL/R/predict.R
MLGL/R/simuBlockGaussian.R
MLGL/R/stability.R
MLGL/R/testFunction.R
MLGL/R/trash.R
MLGL/R/treeFunction.R
MLGL/R/uniqueGroupHclust.R
MLGL/R/utilities.R
MLGL/TODO

MLGL/man

MLGL/man/Chisqtest.Rd
MLGL/man/Ftest.Rd
MLGL/man/MLGL-package.Rd
MLGL/man/MLGL.Rd
MLGL/man/coef.MLGL.Rd
MLGL/man/coef.cv.MLGL.Rd
MLGL/man/cv.MLGL.Rd
MLGL/man/fullProcess.Rd
MLGL/man/hierarchicalFDR.Rd
MLGL/man/hierarchicalFWER.Rd
MLGL/man/listToMatrix.Rd
MLGL/man/overlapgglasso.Rd
MLGL/man/partialChisqtest.Rd
MLGL/man/partialFtest.Rd
MLGL/man/plot.MLGL.Rd
MLGL/man/plot.cv.MLGL.Rd
MLGL/man/plot.stability.MLGL.Rd
MLGL/man/predict.MLGL.Rd
MLGL/man/predict.cv.MLGL.Rd
MLGL/man/selFDR.Rd
MLGL/man/selFWER.Rd
MLGL/man/simuBlockGaussian.Rd
MLGL/man/stability.MLGL.Rd
MLGL/man/uniqueGroupHclust.Rd
Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

All documentation is copyright its authors; we didn't write any of that.