Files in MSToolkit
The MSToolkit library for clinical trial design

TODO

TODO.grep

DESCRIPTION

NAMESPACE

inst/COPYRIGHT

inst/ECTD.ini

inst/sasAnalysis.sas

inst/Runit/report.html

inst/Runit/runit.compileSummary.R

inst/Runit/Makefile

inst/Runit/micro0001.csv

inst/Runit/runit.macroEvaluation.R

inst/Runit/wrong1.csv

inst/Runit/testdata.supportfunctions/micro0004.csv

inst/Runit/testdata.supportfunctions/testdata.checkCsvFile.2.csv

inst/Runit/testdata.supportfunctions/testdata.createEmptyMicro.1.csv

inst/Runit/testdata.supportfunctions/micro0002.csv

inst/Runit/testdata.supportfunctions/micro0003.csv

inst/Runit/testdata.supportfunctions/testdata.checkCsvFile.1.csv

inst/Runit/testdata.supportfunctions/micro0005.csv

inst/Runit/testdata.supportfunctions/micro0001.csv

inst/Runit/testdata.supportfunctions/testdata.checkCsvFile.4.csv

inst/Runit/testdata.supportfunctions/testdata.checkCsvFile.3.csv

inst/Runit/testdata.datastorage/NONMEMDataWithHeader.fit

inst/Runit/testdata.datastorage/microSummary.csv

inst/Runit/testdata.datastorage/ReplicateSample.csv

inst/Runit/testdata.datastorage/macro0001.csv

inst/Runit/testdata.datastorage/NONMEMcsv.csv

inst/Runit/testdata.datastorage/micro0001.csv

inst/Runit/testdata.datastorage/NONMEMDataNoHeader.fit

inst/Runit/testdata.datastorage/replicate0010.csv

inst/Runit/testdata.datastorage/ReplicateData/replicate0010.csv

inst/Runit/testdata.datastorage/MicroEvaluation/micro0001.csv

inst/Runit/testdata.datastorage/MacroEvaluation/macro0001.csv

inst/Runit/data/createCovariates/testCovariates.csv

inst/Runit/data/createCovariates/wrongTestCovariates.csv

inst/Runit/data/createCovariates/testSameRow.csv

inst/Runit/data/analyseRep/ReplicateData/replicate0003.csv

inst/Runit/data/analyseRep/ReplicateData/replicate0001.csv

inst/Runit/data/analyseRep/ReplicateData/replicate0002.csv

inst/Runit/data/createParameters/testParam.csv

inst/Runit/data/createParameters/testParam.spaceDelim

inst/Runit/data/createParameters/testParam.nonmem

inst/Runit/data/createParameters/testParam.tabDelim

inst/Runit/data/createParameters/wrongTestParam.csv

inst/Runit/data/compileSummary/macroSummary.csv

inst/Runit/data/compileSummary/microSummary.csv

inst/Runit/data/compileSummary/MicroEvaluation/micro0004.csv

inst/Runit/data/compileSummary/MicroEvaluation/micro0002.csv

inst/Runit/data/compileSummary/MicroEvaluation/micro0003.csv

inst/Runit/data/compileSummary/MicroEvaluation/micro0005.csv

inst/Runit/data/compileSummary/MicroEvaluation/micro0001.csv

inst/Runit/data/compileSummary/MacroEvaluation/macro0002.csv

inst/Runit/data/compileSummary/MacroEvaluation/macro0001.csv

inst/Runit/data/compileSummary/MacroEvaluation/macro0003.csv

inst/Runit/data/compileSummary/MacroEvaluation/macro0004.csv

inst/Runit/data/compileSummary/MacroEvaluation/macro0005.csv

inst/Runit/data/macroEvaluation/micro0001.csv

inst/Runit/data/NONMEM/waso.tab

inst/Runit/data/NONMEM/waso.out

inst/Runit/data/NONMEM/wasodata.csv

inst/Runit/data/NONMEM/waso.ctl

inst/Runit/data/compileSummary2/MicroEvaluation/micro0004.csv

inst/Runit/data/compileSummary2/MicroEvaluation/micro0002.csv

inst/Runit/data/compileSummary2/MicroEvaluation/micro0003.csv

inst/Runit/data/compileSummary2/MicroEvaluation/micro0005.csv

inst/Runit/data/compileSummary2/MicroEvaluation/micro0001.csv

inst/Runit/data/compileSummary2/MacroEvaluation/macro0002.csv

inst/Runit/data/compileSummary2/MacroEvaluation/macro0001.csv

inst/Runit/data/compileSummary2/MacroEvaluation/macro0003.csv

inst/Runit/data/compileSummary2/MacroEvaluation/macro0004.csv

inst/Runit/data/compileSummary2/MacroEvaluation/macro0005.csv

inst/systemTest/runit.generateData.R inst/systemTest/runit.analyseData.R

inst/systemTest/data/testParam.csv

inst/systemTest/data/testCovariates.csv

inst/systemTest/data/testParam.spaceDelim

inst/systemTest/data/testParam.nonmem

inst/systemTest/data/testParam.tabDelim

inst/systemTest/data/Interim/ReplicateData/replicate0008.csv

inst/systemTest/data/Interim/ReplicateData/replicate0003.csv

inst/systemTest/data/Interim/ReplicateData/replicate0007.csv

inst/systemTest/data/Interim/ReplicateData/replicate0001.csv

inst/systemTest/data/Interim/ReplicateData/replicate0006.csv

inst/systemTest/data/Interim/ReplicateData/replicate0002.csv

inst/systemTest/data/Interim/ReplicateData/replicate0005.csv

inst/systemTest/data/Interim/ReplicateData/replicate0004.csv

inst/systemTest/data/Scripts/rAnalysisScript.R

inst/systemTest/data/Scripts/analysisCode.sas

inst/systemTest/data/Scripts/ReplicateData/replicate0003.csv

inst/systemTest/data/Scripts/ReplicateData/replicate0001.csv

inst/systemTest/data/Scripts/ReplicateData/replicate0002.csv

exec/compile

demo/emax.R demo/emaxfit.R

demo/00Index

R/analyzeRep.R R/createCovariates.R R/allocateTreatments.R R/createInterims.R R/parsePredCode.R R/createTimeVaryingCovariates.R R/createResponseVariable.R R/getReplicates.R R/mstoolkitUnitTests.R R/zzz.R R/checkMicroFormat.R R/createNmParSamples.R R/ectdWarning.R R/checkSimAlpha.R R/ectdStop.R R/writeLogFile.R R/summarizeTrialMeans.R R/createExternalCovariates.R R/createMCAR.R R/calculateSimTrialMeans.R R/compileSummary.R R/generateData.R R/internal.datastorage.R R/parseCharInput.R R/utils.R R/addResidualError.R R/parseCovMatrix.R R/readData.R R/operators.R R/initialChar.R R/convertSASIncludeRows.R R/createExternalParameters.R R/createParameters.R R/createDirectories.r R/createNormalParameters.R R/createDiscreteCovariates.R R/createContinuousCovariates.R R/checkDropOutFun.R R/validNames.R R/parseRangeCode.R R/checkMacroFormat.R R/createTreatments.R R/interimAnalysis.R R/convertToSASCode.R R/analyzeData.r R/metaManagement.R R/createDropout.R R/parseHashString.R R/checkSymmetricPDMatrix.R R/writeData.r R/createEmptyMicro.R R/performAnalysis.R R/calculateDiffsFromBase.R R/createNmMatrix.R R/createTvDefinition.R R/macroEvaluation.R R/applyPredCode.R R/calculateObsSummary.R R/removeDirectories.r R/createResponse.R R/readAllData.R R/parseRCode.R man/getReplicates.Rd man/parseCharInput.Rd man/MSToolkit-package.Rd man/initialChar.Rd man/createInterims.Rd man/createContinuousCovariates.Rd man/writeLogFile.Rd man/ectdDataMethod.Rd man/convertToSASCode.Rd man/setEctdVerbose.Rd man/checkDropOutFun.Rd man/readData.Rd man/createExternalParameters.Rd man/parseRangeCode.Rd man/convertSASIncludeRows.Rd man/checkColNames.Rd man/parseHashString.Rd man/analyzeRep.Rd man/ectdStop.Rd man/calculateDiffsFromBase.Rd man/summarizeTrialMeans.Rd man/validNames.Rd man/createTreatments.Rd man/createNmMatrix.Rd man/macroEvaluation.Rd man/applyPredCode.Rd man/analyzeData.Rd man/ectdColNames.Rd man/removeDirectories.Rd man/createNmParSamples.Rd man/createCovariates.Rd man/generateData.Rd man/createResponseVariable.Rd man/createExternalCovariates.Rd man/createNormalParameters.Rd man/ectdExternalPath.Rd man/createMCAR.Rd man/checkSymmetricPDMatrix.Rd man/calculateObsSummary.Rd man/addResidualError.Rd man/createTimeVaryingCovariates.Rd man/readAllData.Rd man/createDiscreteCovariates.Rd man/createEmptyMicro.Rd man/tvDefinition-class.Rd man/mstoolkitUnitTests.Rd man/createDropout.Rd man/writeData.Rd man/parseCovMatrix.Rd man/createParameters.Rd man/compileSummary.Rd man/parseRCode.Rd man/calculateSimTrialMeans.Rd man/checkMicroFormat.Rd man/createResponse.Rd man/createTvDefinition.Rd man/allocateTreatments.Rd man/checkSimAlpha.Rd man/performAnalysis.Rd man/createDirectories.Rd man/interimAnalysis.Rd man/checkMacroFormat.Rd tests/doRUnit.R

tests/ectd.log

MSToolkit documentation built on May 2, 2019, 6:30 p.m.

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MSToolkit
The MSToolkit library for clinical trial design

Files in MSToolkit
The MSToolkit library for clinical trial design

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MSToolkit The MSToolkit library for clinical trial design

Files in MSToolkit The MSToolkit library for clinical trial design

R Package Documentation

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We want your feedback!

MSToolkit
The MSToolkit library for clinical trial design

Files in MSToolkit
The MSToolkit library for clinical trial design