Man pages for MSToolkit
The MSToolkit library for clinical trial design

addResidualError	Add residual error to the response.
allocateTreatments	Allocate treatment to subjects
analyzeData	Analyze simulated data replicates
analyzeRep	Analyse a single replicate of data
applyPredCode	Parses and applys NONMEM statements
calculateDiffsFromBase	Calculate differences from baseline
calculateObsSummary	Calculate Observed Data Summary
calculateSimTrialMeans	Calculate Simulated Trial Means
checkColNames	Parse alpha value
checkDropOutFun	check the user supplied drop out function
checkMacroFormat	check the macro format dataset
checkMicroFormat	Check that an input data structure is a valid "Micro...
checkSimAlpha	Parse alpha value
checkSymmetricPDMatrix	Checks if a matrix is symmetric and positive definite
compileSummary	Compile all Micro or Macro evaluation data
convertSASIncludeRows	Create a SAS 'IF' statement
convertToSASCode	Convert R to SAS Statements
createContinuousCovariates	Create a set of continuous covariates
createCovariates	Create covariates
createDirectories	Create replicate data, micro evaluation, and macro evaluation...
createDiscreteCovariates	Create covariates from a discrete distribution
createDropout	Adds dropout to a simulated dataset
createEmptyMicro	Create an empty micro evaluation data frame
createExternalCovariates	Create covariates by sampling from an external file
createExternalParameters	Sample parameters from an external file
createInterims	create the interim flag
createMCAR	Missing Completely at Random
createNmMatrix	Creates a matrix based on a "NONMEM style" vector
createNmParSamples	Simulate parameter sets from a NONMEM run object
createNormalParameters	Create parameters based on a multivariate normal distribution
createParameters	Create parameter data for subjects in a simulated trial
createResponse	High-level function for the response component.
createResponseVariable	Create a response from a data set and an equation
createTimeVaryingCovariates	Create a set of time-varying covariates
createTreatments	Create Treatment Design Data
createTvDefinition	Create "Typical Value" Definition
ectdColNames	Control of default column names
ectdDataMethod	Current data storage method
ectdExternalPath	Controls paths to a set of external execution paths
ectdStop	Error handling functions for the ectd package.
generateData	Generate simulated data replicates
getReplicates	Trial replicates vector
initialChar	Convert the first letter that occurs in a string to lower...
interimAnalysis	interim Analysis
macroEvaluation	Macro Evaluation
MSToolkit-package	Generates and analyzes simulated trial data
mstoolkitUnitTests	Unit/System Tests suite for the MSToolkit package
parseCharInput	Parse a comma seperated string
parseCovMatrix	Parse a covariance matrix
parseHashString	Process a string seperated by hash symbols or a vector (or...
parseRangeCode	Parse a numerical range expression
parseRCode	Parse R Code
performAnalysis	Runs the analysis code against one dataset
readAllData	Read scenario data
readData	Read scenario data
removeDirectories	Remove directories
setEctdVerbose	MSToolkit package options
summarizeTrialMeans	Summarize Trial Mean Data
tvDefinition-class	tvDefinition class
validNames	Check if a character string is a valid R variable name
writeData	Write scenario data
writeLogFile	Write a job log file