Matrix: Sparse and Dense Matrix Classes and Methods

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Classes and methods for dense and sparse matrices and operations on them using 'LAPACK' and 'SuiteSparse'.

Author
Douglas Bates <bates@stat.wisc.edu> and Martin Maechler
Date of publication
2016-11-28 10:37:05
Maintainer
Martin Maechler <mmaechler+Matrix@gmail.com>
License
GPL (>= 2) | file LICENCE
Version
1.2-8
URLs

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Man pages

abIndex-class
Class "abIndex" of Abstract Index Vectors
abIseq
Sequence Generation of "abIndex", Abstract Index Vectors
all.equal-methods
Matrix Package Methods for Function all.equal()
all-methods
"Matrix" Methods for Functions all() and any()
atomicVector-class
Virtual Class "atomicVector" of Atomic Vectors
band
Extract bands of a matrix
bandSparse
Construct Sparse Banded Matrix from (Sup-/Super-) Diagonals
bdiag
Construct a Block Diagonal Matrix
boolean-matprod
Boolean Arithmetic Matrix Products: '%&%' and Methods
BunchKaufman-methods
Bunch-Kaufman Decomposition Methods
CAex
Albers' example Matrix with "Difficult" Eigen Factorization
cBind
Versions of 'cbind' and 'rbind' recursively built on...
CHMfactor-class
CHOLMOD-based Cholesky Factorizations
chol
Choleski Decomposition - 'Matrix' S4 Generic and Methods
chol2inv-methods
Inverse from Choleski or QR Decomposition - Matrix Methods
Cholesky
Cholesky Decomposition of a Sparse Matrix
Cholesky-class
Cholesky and Bunch-Kaufman Decompositions
colSums
Form Row and Column Sums and Means
compMatrix-class
Class "compMatrix" of Composite (Factorizable) Matrices
condest
Compute Approximate CONDition number and 1-Norm of (Large)...
CsparseMatrix-class
Class "CsparseMatrix" of Sparse Matrices in Column-compressed...
ddenseMatrix-class
Virtual Class "ddenseMatrix" of Numeric Dense Matrices
ddiMatrix-class
Class "ddiMatrix" of Diagonal Numeric Matrices
denseMatrix-class
Virtual Class "denseMatrix" of All Dense Matrices
dgCMatrix-class
Compressed, sparse, column-oriented numeric matrices
dgeMatrix-class
Class "dgeMatrix" of Dense Numeric (S4 Class) Matrices
dgRMatrix-class
Sparse Compressed, Row-oriented Numeric Matrices
dgTMatrix-class
Sparse matrices in triplet form
Diagonal
Create Diagonal Matrix Object
diagonalMatrix-class
Class "diagonalMatrix" of Diagonal Matrices
diagU2N
Transform Triangular Matrices from Unit Triangular to General...
dMatrix-class
(Virtual) Class "dMatrix" of "double" Matrices
dpoMatrix-class
Positive Semi-definite Dense Numeric Matrices
drop0
Drop "Explicit Zeroes" from a Sparse Matrix
dsCMatrix-class
Numeric Symmetric Sparse (column compressed) Matrices
dsparseMatrix-class
Virtual Class "dsparseMatrix" of Numeric Sparse Matrices
dsRMatrix-class
Symmetric Sparse Compressed Row Matrices
dsyMatrix-class
Symmetric Dense Numeric Matrices
dtCMatrix-class
Triangular, (compressed) sparse column matrices
dtpMatrix-class
Packed Triangular Dense Matrices - "dtpMatrix"
dtrMatrix-class
Triangular, dense, numeric matrices
dtRMatrix-class-def
Triangular Sparse Compressed Row Matrices
expand
Expand a Decomposition into Factors
expm
Matrix Exponential
externalFormats
Read and write external matrix formats
facmul
Multiplication by Decomposition Factors
forceSymmetric
Force a Matrix to 'symmetricMatrix' Without Symmetry Checks
formatSparseM
Formatting Sparse Numeric Matrices Utilities
generalMatrix-class
Class "generalMatrix" of General Matrices
graph2T
Conversions "graph" <-> (sparse) Matrix
Hilbert
Generate a Hilbert matrix
image-methods
Methods for image() in Package 'Matrix'
index-class
Virtual Class "index" - Simple Class for Matrix Indices
indMatrix-class
Index Matrices
invPerm
Inverse Permutation Vector
is.na-methods
is.na(), is.infinite() Methods for 'Matrix' Objects
is.null.DN
Are the Dimnames 'dn' NULL-like ?
isSymmetric-methods
Methods for Function isSymmetric in Package 'Matrix'
isTriangular
isTriangular() and isDiagonal() Methods
KhatriRao
Khatri-Rao Matrix Product
KNex
Koenker-Ng Example Sparse Model Matrix and Response Vector
kronecker-methods
Methods for Function 'kronecker()' in Package 'Matrix'
ldenseMatrix-class
Virtual Class "ldenseMatrix" of Dense Logical Matrices
ldiMatrix-class
Class "ldiMatrix" of Diagonal Logical Matrices
lgeMatrix-class
Class "lgeMatrix" of General Dense Logical Matrices
lsparseMatrix-classes
Sparse logical matrices
lsyMatrix-class
Symmetric Dense Logical Matrices
ltrMatrix-class
Triangular Dense Logical Matrices
lu
(Generalized) Triangular Decomposition of a Matrix
LU-class
LU (dense) Matrix Decompositions
Matrix
Construct a Classed Matrix
Matrix-class
Virtual Class "Matrix" Class of Matrices
MatrixClass
The Matrix (Super-) Class of a Class
MatrixFactorization-class
Class "MatrixFactorization" of Matrix Factorizations
matrix-products
Matrix (Cross) Products (of Transpose)
ndenseMatrix-class
Virtual Class "ndenseMatrix" of Dense Logical Matrices
nearPD
Nearest Positive Definite Matrix
ngeMatrix-class
Class "ngeMatrix" of General Dense Nonzero-pattern Matrices
nMatrix-class
Class "nMatrix" of Non-zero Pattern Matrices
nnzero
The Number of Non-Zero Values of a Matrix
norm
Matrix Norms
nsparseMatrix-classes
Sparse "pattern" Matrices
nsyMatrix-class
Symmetric Dense Nonzero-Pattern Matrices
ntrMatrix-class
Triangular Dense Logical Matrices
number-class
Class "number" of Possibly Complex Numbers
pMatrix-class
Permutation matrices
printSpMatrix
Format and Print Sparse Matrices Flexibly
qr-methods
QR Decomposition - S4 Methods and Generic
rankMatrix
Rank of a Matrix
rcond
Estimate the Reciprocal Condition Number
rep2abI
Replicate Vectors into 'abIndex' Result
replValue-class
Virtual Class "replValue" - Simple Class for subassignment...
rleDiff-class
Class "rleDiff" of rle(diff(.)) Stored Vectors
rsparsematrix
Random Sparse Matrix
RsparseMatrix-class
Class "RsparseMatrix" of Sparse Matrices in Column-compressed...
Schur
Schur Decomposition of a Matrix
Schur-class
Class "Schur" of Schur Matrix Factorizations
solve-methods
Methods in Package Matrix for Function 'solve()'
sparseLU-class
Sparse LU decomposition of a square sparse matrix
sparseMatrix
General Sparse Matrix Construction from Nonzero Entries
sparseMatrix-class
Virtual Class "sparseMatrix" - Mother of Sparse Matrices
SparseM-conv
Sparse Matrix Coercion from and to those from package...
sparse.model.matrix
Construct Sparse Design / Model Matrices
sparseQR-class
Sparse QR decomposition of a sparse matrix
sparseVector
Sparse Vector Construction from Nonzero Entries
sparseVector-class
Sparse Vector Classes
spMatrix
Sparse Matrix Constructor From Triplet
Subassign-methods
Methods for "[<-" - Assigning to Subsets for 'Matrix'
symmetricMatrix-class
Virtual Class of Symmetric Matrices in Package Matrix
symmpart
Symmetric Part and Skew(symmetric) Part of a Matrix
triangularMatrix-class
Virtual Class of Triangular Matrices in Package Matrix
TsparseMatrix-class
Class "TsparseMatrix" of Sparse Matrices in Triplet Form
uniqTsparse
Unique (Sorted) TsparseMatrix Representations
unpack
Representation of Packed and Unpacked (Dense) Matrices
unused-classes
Virtual Classes Not Yet Really Implemented and Used
updown
Up- and Down-Dating a Cholesky Decomposition
USCounties
USCounties Contiguity Matrix
Xtrct-methods
Methods for "[": Extraction or Subsetting in Package 'Matrix'

Files in this package

Matrix/.Rinstignore
Matrix/ChangeLog
Matrix/DESCRIPTION
Matrix/LICENCE
Matrix/NAMESPACE
Matrix/R
Matrix/R/AllClass.R
Matrix/R/AllGeneric.R
Matrix/R/Auxiliaries.R
Matrix/R/CHMfactor.R
Matrix/R/Csparse.R
Matrix/R/HBMM.R
Matrix/R/Hilbert.R
Matrix/R/KhatriRao.R
Matrix/R/LU.R
Matrix/R/Math.R
Matrix/R/Matrix.R
Matrix/R/MatrixFactorization.R
Matrix/R/Ops.R
Matrix/R/Rsparse.R
Matrix/R/SparseM-conv.R
Matrix/R/Summary.R
Matrix/R/Tsparse.R
Matrix/R/abIndex.R
Matrix/R/bandSparse.R
Matrix/R/bind2.R
Matrix/R/colSums.R
Matrix/R/condest.R
Matrix/R/corMatrix.R
Matrix/R/dMatrix.R
Matrix/R/ddenseMatrix.R
Matrix/R/denseMatrix.R
Matrix/R/dgCMatrix.R
Matrix/R/dgTMatrix.R
Matrix/R/dgeMatrix.R
Matrix/R/diagMatrix.R
Matrix/R/dpoMatrix.R
Matrix/R/dppMatrix.R
Matrix/R/dsCMatrix.R
Matrix/R/dsTMatrix.R
Matrix/R/dspMatrix.R
Matrix/R/dsparseMatrix.R
Matrix/R/dsyMatrix.R
Matrix/R/dtCMatrix.R
Matrix/R/dtTMatrix.R
Matrix/R/dtpMatrix.R
Matrix/R/dtrMatrix.R
Matrix/R/eigen.R
Matrix/R/expm.R
Matrix/R/indMatrix.R
Matrix/R/kronecker.R
Matrix/R/lMatrix.R
Matrix/R/ldenseMatrix.R
Matrix/R/lgCMatrix.R
Matrix/R/lgTMatrix.R
Matrix/R/lsCMatrix.R
Matrix/R/lsTMatrix.R
Matrix/R/lsparseMatrix.R
Matrix/R/ltCMatrix.R
Matrix/R/ltTMatrix.R
Matrix/R/ndenseMatrix.R
Matrix/R/nearPD.R
Matrix/R/ngCMatrix.R
Matrix/R/ngTMatrix.R
Matrix/R/nnzero.R
Matrix/R/not.R
Matrix/R/nsCMatrix.R
Matrix/R/nsTMatrix.R
Matrix/R/nsparseMatrix.R
Matrix/R/ntCMatrix.R
Matrix/R/ntTMatrix.R
Matrix/R/pMatrix.R
Matrix/R/products.R
Matrix/R/rankMatrix.R
Matrix/R/spModels.R
Matrix/R/sparseMatrix.R
Matrix/R/sparseQR.R
Matrix/R/sparseVector.R
Matrix/R/symmetricMatrix.R
Matrix/R/triangularMatrix.R
Matrix/R/zzz.R
Matrix/TODO
Matrix/build
Matrix/build/vignette.rds
Matrix/cleanup
Matrix/data
Matrix/data/CAex.R
Matrix/data/KNex.R
Matrix/data/USCounties.R
Matrix/inst
Matrix/inst/Copyrights
Matrix/inst/Doxyfile
Matrix/inst/NEWS.Rd
Matrix/inst/doc
Matrix/inst/doc/Announce.txt
Matrix/inst/doc/Comparisons.R
Matrix/inst/doc/Comparisons.Rnw
Matrix/inst/doc/Comparisons.pdf
Matrix/inst/doc/Design-issues.R
Matrix/inst/doc/Design-issues.Rnw
Matrix/inst/doc/Design-issues.pdf
Matrix/inst/doc/Intro2Matrix.R
Matrix/inst/doc/Intro2Matrix.Rnw
Matrix/inst/doc/Intro2Matrix.pdf
Matrix/inst/doc/Introduction.R
Matrix/inst/doc/Introduction.Rnw
Matrix/inst/doc/Introduction.pdf
Matrix/inst/doc/SuiteSparse
Matrix/inst/doc/SuiteSparse/AMD.txt
Matrix/inst/doc/SuiteSparse/CHOLMOD.txt
Matrix/inst/doc/SuiteSparse/COLAMD.txt
Matrix/inst/doc/SuiteSparse/SPQR.txt
Matrix/inst/doc/SuiteSparse/SuiteSparse_config.txt
Matrix/inst/doc/SuiteSparse/UserGuides.txt
Matrix/inst/doc/sparseModels.R
Matrix/inst/doc/sparseModels.Rnw
Matrix/inst/doc/sparseModels.pdf
Matrix/inst/external
Matrix/inst/external/CAex_slots.rda
Matrix/inst/external/KNex_slots.rda
Matrix/inst/external/USCounties_slots.rda
Matrix/inst/external/lund_a.mtx
Matrix/inst/external/lund_a.rsa
Matrix/inst/external/pores_1.mtx
Matrix/inst/external/symA.rda
Matrix/inst/external/symW.rda
Matrix/inst/external/test3comp.rda
Matrix/inst/external/utm300.rua
Matrix/inst/external/wrong.mtx
Matrix/inst/include
Matrix/inst/include/Matrix.h
Matrix/inst/include/Matrix_stubs.c
Matrix/inst/include/cholmod.h
Matrix/inst/po
Matrix/inst/po/de
Matrix/inst/po/de/LC_MESSAGES
Matrix/inst/po/de/LC_MESSAGES/Matrix.mo
Matrix/inst/po/de/LC_MESSAGES/R-Matrix.mo
Matrix/inst/po/en@quot
Matrix/inst/po/en@quot/LC_MESSAGES
Matrix/inst/po/en@quot/LC_MESSAGES/Matrix.mo
Matrix/inst/po/en@quot/LC_MESSAGES/R-Matrix.mo
Matrix/inst/po/fr
Matrix/inst/po/fr/LC_MESSAGES
Matrix/inst/po/fr/LC_MESSAGES/Matrix.mo
Matrix/inst/po/fr/LC_MESSAGES/R-Matrix.mo
Matrix/inst/po/ko
Matrix/inst/po/ko/LC_MESSAGES
Matrix/inst/po/ko/LC_MESSAGES/R-Matrix.mo
Matrix/inst/po/pl
Matrix/inst/po/pl/LC_MESSAGES
Matrix/inst/po/pl/LC_MESSAGES/Matrix.mo
Matrix/inst/po/pl/LC_MESSAGES/R-Matrix.mo
Matrix/inst/test-tools-1.R
Matrix/inst/test-tools-Matrix.R
Matrix/inst/test-tools.R
Matrix/man
Matrix/man/BunchKaufman-methods.Rd
Matrix/man/CAex.Rd
Matrix/man/CHMfactor-class.Rd
Matrix/man/Cholesky-class.Rd
Matrix/man/Cholesky.Rd
Matrix/man/CsparseMatrix-class.Rd
Matrix/man/Diagonal.Rd
Matrix/man/Hilbert.Rd
Matrix/man/KNex.Rd
Matrix/man/KhatriRao.Rd
Matrix/man/LU-class.Rd
Matrix/man/Matrix-class.Rd
Matrix/man/Matrix.Rd
Matrix/man/MatrixClass.Rd
Matrix/man/MatrixFactorization-class.Rd
Matrix/man/RsparseMatrix-class.Rd
Matrix/man/Schur-class.Rd
Matrix/man/Schur.Rd
Matrix/man/SparseM-conv.Rd
Matrix/man/Subassign-methods.Rd
Matrix/man/TsparseMatrix-class.Rd
Matrix/man/USCounties.Rd
Matrix/man/Xtrct-methods.Rd
Matrix/man/abIndex-class.Rd
Matrix/man/abIseq.Rd
Matrix/man/all-methods.Rd
Matrix/man/all.equal-methods.Rd
Matrix/man/atomicVector-class.Rd
Matrix/man/band.Rd
Matrix/man/bandSparse.Rd
Matrix/man/bdiag.Rd
Matrix/man/boolean-matprod.Rd
Matrix/man/cBind.Rd
Matrix/man/chol.Rd
Matrix/man/chol2inv-methods.Rd
Matrix/man/colSums.Rd
Matrix/man/compMatrix-class.Rd
Matrix/man/condest.Rd
Matrix/man/dMatrix-class.Rd
Matrix/man/ddenseMatrix-class.Rd
Matrix/man/ddiMatrix-class.Rd
Matrix/man/denseMatrix-class.Rd
Matrix/man/dgCMatrix-class.Rd
Matrix/man/dgRMatrix-class.Rd
Matrix/man/dgTMatrix-class.Rd
Matrix/man/dgeMatrix-class.Rd
Matrix/man/diagU2N.Rd
Matrix/man/diagonalMatrix-class.Rd
Matrix/man/dpoMatrix-class.Rd
Matrix/man/drop0.Rd
Matrix/man/dsCMatrix-class.Rd
Matrix/man/dsRMatrix-class.Rd
Matrix/man/dsparseMatrix-class.Rd
Matrix/man/dsyMatrix-class.Rd
Matrix/man/dtCMatrix-class.Rd
Matrix/man/dtRMatrix-class-def.Rd
Matrix/man/dtpMatrix-class.Rd
Matrix/man/dtrMatrix-class.Rd
Matrix/man/expand.Rd
Matrix/man/expm.Rd
Matrix/man/externalFormats.Rd
Matrix/man/facmul.Rd
Matrix/man/forceSymmetric.Rd
Matrix/man/formatSparseM.Rd
Matrix/man/generalMatrix-class.Rd
Matrix/man/graph2T.Rd
Matrix/man/image-methods.Rd
Matrix/man/indMatrix-class.Rd
Matrix/man/index-class.Rd
Matrix/man/invPerm.Rd
Matrix/man/is.na-methods.Rd
Matrix/man/is.null.DN.Rd
Matrix/man/isSymmetric-methods.Rd
Matrix/man/isTriangular.Rd
Matrix/man/kronecker-methods.Rd
Matrix/man/ldenseMatrix-class.Rd
Matrix/man/ldiMatrix-class.Rd
Matrix/man/lgeMatrix-class.Rd
Matrix/man/lsparseMatrix-classes.Rd
Matrix/man/lsyMatrix-class.Rd
Matrix/man/ltrMatrix-class.Rd
Matrix/man/lu.Rd
Matrix/man/matrix-products.Rd
Matrix/man/nMatrix-class.Rd
Matrix/man/ndenseMatrix-class.Rd
Matrix/man/nearPD.Rd
Matrix/man/ngeMatrix-class.Rd
Matrix/man/nnzero.Rd
Matrix/man/norm.Rd
Matrix/man/nsparseMatrix-classes.Rd
Matrix/man/nsyMatrix-class.Rd
Matrix/man/ntrMatrix-class.Rd
Matrix/man/number-class.Rd
Matrix/man/pMatrix-class.Rd
Matrix/man/printSpMatrix.Rd
Matrix/man/qr-methods.Rd
Matrix/man/rankMatrix.Rd
Matrix/man/rcond.Rd
Matrix/man/rep2abI.Rd
Matrix/man/replValue-class.Rd
Matrix/man/rleDiff-class.Rd
Matrix/man/rsparsematrix.Rd
Matrix/man/solve-methods.Rd
Matrix/man/spMatrix.Rd
Matrix/man/sparse.model.matrix.Rd
Matrix/man/sparseLU-class.Rd
Matrix/man/sparseMatrix-class.Rd
Matrix/man/sparseMatrix.Rd
Matrix/man/sparseQR-class.Rd
Matrix/man/sparseVector-class.Rd
Matrix/man/sparseVector.Rd
Matrix/man/symmetricMatrix-class.Rd
Matrix/man/symmpart.Rd
Matrix/man/triangularMatrix-class.Rd
Matrix/man/uniqTsparse.Rd
Matrix/man/unpack.Rd
Matrix/man/unused-classes.Rd
Matrix/man/updown.Rd
Matrix/po
Matrix/po/Matrix.pot
Matrix/po/R-Matrix.pot
Matrix/po/R-de.po
Matrix/po/R-en@quot.po
Matrix/po/R-fr.po
Matrix/po/R-ko.po
Matrix/po/R-pl.po
Matrix/po/de.po
Matrix/po/en@quot.po
Matrix/po/fr.po
Matrix/po/ko.po
Matrix/po/pl.po
Matrix/po/update-me.sh
Matrix/src
Matrix/src/AMD
Matrix/src/AMD/Include
Matrix/src/AMD/Include/amd.h
Matrix/src/AMD/Include/amd_internal.h
Matrix/src/AMD/Makefile
Matrix/src/AMD/Source
Matrix/src/AMD/Source/Makefile
Matrix/src/AMD/Source/amd_1.c
Matrix/src/AMD/Source/amd_2.c
Matrix/src/AMD/Source/amd_aat.c
Matrix/src/AMD/Source/amd_control.c
Matrix/src/AMD/Source/amd_defaults.c
Matrix/src/AMD/Source/amd_dump.c
Matrix/src/AMD/Source/amd_global.c
Matrix/src/AMD/Source/amd_info.c
Matrix/src/AMD/Source/amd_order.c
Matrix/src/AMD/Source/amd_post_tree.c
Matrix/src/AMD/Source/amd_postorder.c
Matrix/src/AMD/Source/amd_preprocess.c
Matrix/src/AMD/Source/amd_valid.c
Matrix/src/AMD/Source/make-Make.R
Matrix/src/AMD/Source/make_o.mk
Matrix/src/CHMfactor.c
Matrix/src/CHMfactor.h
Matrix/src/CHOLMOD
Matrix/src/CHOLMOD/Check
Matrix/src/CHOLMOD/Check/License.txt
Matrix/src/CHOLMOD/Check/cholmod_check.c
Matrix/src/CHOLMOD/Check/cholmod_read.c
Matrix/src/CHOLMOD/Check/cholmod_write.c
Matrix/src/CHOLMOD/Cholesky
Matrix/src/CHOLMOD/Cholesky/License.txt
Matrix/src/CHOLMOD/Cholesky/cholmod_amd.c
Matrix/src/CHOLMOD/Cholesky/cholmod_analyze.c
Matrix/src/CHOLMOD/Cholesky/cholmod_colamd.c
Matrix/src/CHOLMOD/Cholesky/cholmod_etree.c
Matrix/src/CHOLMOD/Cholesky/cholmod_factorize.c
Matrix/src/CHOLMOD/Cholesky/cholmod_postorder.c
Matrix/src/CHOLMOD/Cholesky/cholmod_rcond.c
Matrix/src/CHOLMOD/Cholesky/cholmod_resymbol.c
Matrix/src/CHOLMOD/Cholesky/cholmod_rowcolcounts.c
Matrix/src/CHOLMOD/Cholesky/cholmod_rowfac.c
Matrix/src/CHOLMOD/Cholesky/cholmod_solve.c
Matrix/src/CHOLMOD/Cholesky/cholmod_spsolve.c
Matrix/src/CHOLMOD/Cholesky/debug_c
Matrix/src/CHOLMOD/Cholesky/t_cholmod_lsolve.c
Matrix/src/CHOLMOD/Cholesky/t_cholmod_ltsolve.c
Matrix/src/CHOLMOD/Cholesky/t_cholmod_rowfac.c
Matrix/src/CHOLMOD/Cholesky/t_cholmod_solve.c
Matrix/src/CHOLMOD/Core
Matrix/src/CHOLMOD/Core/License.txt
Matrix/src/CHOLMOD/Core/cholmod_aat.c
Matrix/src/CHOLMOD/Core/cholmod_add.c
Matrix/src/CHOLMOD/Core/cholmod_band.c
Matrix/src/CHOLMOD/Core/cholmod_change_factor.c
Matrix/src/CHOLMOD/Core/cholmod_common.c
Matrix/src/CHOLMOD/Core/cholmod_complex.c
Matrix/src/CHOLMOD/Core/cholmod_copy.c
Matrix/src/CHOLMOD/Core/cholmod_dense.c
Matrix/src/CHOLMOD/Core/cholmod_error.c
Matrix/src/CHOLMOD/Core/cholmod_factor.c
Matrix/src/CHOLMOD/Core/cholmod_memory.c
Matrix/src/CHOLMOD/Core/cholmod_sparse.c
Matrix/src/CHOLMOD/Core/cholmod_transpose.c
Matrix/src/CHOLMOD/Core/cholmod_triplet.c
Matrix/src/CHOLMOD/Core/cholmod_version.c
Matrix/src/CHOLMOD/Core/t_cholmod_change_factor.c
Matrix/src/CHOLMOD/Core/t_cholmod_dense.c
Matrix/src/CHOLMOD/Core/t_cholmod_transpose.c
Matrix/src/CHOLMOD/Core/t_cholmod_triplet.c
Matrix/src/CHOLMOD/Include
Matrix/src/CHOLMOD/Include/License.txt
Matrix/src/CHOLMOD/Include/README.txt
Matrix/src/CHOLMOD/Include/cholmod.h
Matrix/src/CHOLMOD/Include/cholmod_blas.h
Matrix/src/CHOLMOD/Include/cholmod_camd.h
Matrix/src/CHOLMOD/Include/cholmod_check.h
Matrix/src/CHOLMOD/Include/cholmod_cholesky.h
Matrix/src/CHOLMOD/Include/cholmod_complexity.h
Matrix/src/CHOLMOD/Include/cholmod_config.h
Matrix/src/CHOLMOD/Include/cholmod_core.h
Matrix/src/CHOLMOD/Include/cholmod_internal.h
Matrix/src/CHOLMOD/Include/cholmod_io64.h
Matrix/src/CHOLMOD/Include/cholmod_matrixops.h
Matrix/src/CHOLMOD/Include/cholmod_modify.h
Matrix/src/CHOLMOD/Include/cholmod_partition.h
Matrix/src/CHOLMOD/Include/cholmod_supernodal.h
Matrix/src/CHOLMOD/Include/cholmod_template.h
Matrix/src/CHOLMOD/Lib
Matrix/src/CHOLMOD/Lib/Makefile
Matrix/src/CHOLMOD/Makefile
Matrix/src/CHOLMOD/MatrixOps
Matrix/src/CHOLMOD/MatrixOps/License.txt
Matrix/src/CHOLMOD/MatrixOps/cholmod_drop.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_horzcat.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_norm.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_scale.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_sdmult.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_ssmult.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_submatrix.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_symmetry.c
Matrix/src/CHOLMOD/MatrixOps/cholmod_vertcat.c
Matrix/src/CHOLMOD/MatrixOps/t_cholmod_sdmult.c
Matrix/src/CHOLMOD/Modify
Matrix/src/CHOLMOD/Modify/License.txt
Matrix/src/CHOLMOD/Modify/cholmod_rowadd.c
Matrix/src/CHOLMOD/Modify/cholmod_rowdel.c
Matrix/src/CHOLMOD/Modify/cholmod_updown.c
Matrix/src/CHOLMOD/Modify/t_cholmod_updown.c
Matrix/src/CHOLMOD/Modify/t_cholmod_updown_numkr.c
Matrix/src/CHOLMOD/Partition
Matrix/src/CHOLMOD/Partition/License.txt
Matrix/src/CHOLMOD/Partition/cholmod_camd.c
Matrix/src/CHOLMOD/Partition/cholmod_ccolamd.c
Matrix/src/CHOLMOD/Partition/cholmod_csymamd.c
Matrix/src/CHOLMOD/Partition/cholmod_metis.c
Matrix/src/CHOLMOD/Partition/cholmod_nesdis.c
Matrix/src/CHOLMOD/Supernodal
Matrix/src/CHOLMOD/Supernodal/License.txt
Matrix/src/CHOLMOD/Supernodal/cholmod_super_numeric.c
Matrix/src/CHOLMOD/Supernodal/cholmod_super_solve.c
Matrix/src/CHOLMOD/Supernodal/cholmod_super_symbolic.c
Matrix/src/CHOLMOD/Supernodal/t_cholmod_gpu.c
Matrix/src/CHOLMOD/Supernodal/t_cholmod_super_numeric.c
Matrix/src/CHOLMOD/Supernodal/t_cholmod_super_solve.c
Matrix/src/COLAMD
Matrix/src/COLAMD/Include
Matrix/src/COLAMD/Include/colamd.h
Matrix/src/COLAMD/Makefile
Matrix/src/COLAMD/Source
Matrix/src/COLAMD/Source/Makefile
Matrix/src/COLAMD/Source/colamd.c
Matrix/src/COLAMD/Source/colamd_global.c
Matrix/src/Csparse.c
Matrix/src/Csparse.h
Matrix/src/Makevars
Matrix/src/Mutils.c
Matrix/src/Mutils.h
Matrix/src/SuiteSparse_config
Matrix/src/SuiteSparse_config/Makefile
Matrix/src/SuiteSparse_config/SuiteSparse_config.c
Matrix/src/SuiteSparse_config/SuiteSparse_config.h
Matrix/src/SuiteSparse_config/SuiteSparse_config.mk
Matrix/src/Syms.h
Matrix/src/TMatrix_as.c
Matrix/src/TMatrix_as.h
Matrix/src/Tsparse.c
Matrix/src/Tsparse.h
Matrix/src/abIndex.c
Matrix/src/abIndex.h
Matrix/src/chm_common.c
Matrix/src/chm_common.h
Matrix/src/cs.c
Matrix/src/cs.h
Matrix/src/cs_utils.c
Matrix/src/cs_utils.h
Matrix/src/dense.c
Matrix/src/dense.h
Matrix/src/dgCMatrix.c
Matrix/src/dgCMatrix.h
Matrix/src/dgTMatrix.c
Matrix/src/dgTMatrix.h
Matrix/src/dgeMatrix.c
Matrix/src/dgeMatrix.h
Matrix/src/dpoMatrix.c
Matrix/src/dpoMatrix.h
Matrix/src/dppMatrix.c
Matrix/src/dppMatrix.h
Matrix/src/dsCMatrix.c
Matrix/src/dsCMatrix.h
Matrix/src/dspMatrix.c
Matrix/src/dspMatrix.h
Matrix/src/dsyMatrix.c
Matrix/src/dsyMatrix.h
Matrix/src/dtCMatrix.c
Matrix/src/dtCMatrix.h
Matrix/src/dtTMatrix.c
Matrix/src/dtTMatrix.h
Matrix/src/dtpMatrix.c
Matrix/src/dtpMatrix.h
Matrix/src/dtrMatrix.c
Matrix/src/dtrMatrix.h
Matrix/src/factorizations.c
Matrix/src/factorizations.h
Matrix/src/init.c
Matrix/src/ldense.c
Matrix/src/ldense.h
Matrix/src/lgCMatrix.c
Matrix/src/lgCMatrix.h
Matrix/src/scripts
Matrix/src/scripts/0get-SuiteSparse.sh
Matrix/src/scripts/DEPS.mkf
Matrix/src/scripts/DEPS.mkf_make.sh
Matrix/src/scripts/SOURCES_C.mkf
Matrix/src/scripts/fixup-fn.R
Matrix/src/sparseQR.c
Matrix/src/sparseQR.h
Matrix/src/t_Csparse_subassign.c
Matrix/src/t_Csparse_validate.c
Matrix/src/t_Matrix_rle.c
Matrix/src/t_gCMatrix_colSums.c
Matrix/src/t_sparseVector.c
Matrix/tests
Matrix/tests/Class+Meth.R
Matrix/tests/Simple.R
Matrix/tests/abIndex-tsts.R
Matrix/tests/base-matrix-fun.R
Matrix/tests/bind.R
Matrix/tests/bind.Rout.save
Matrix/tests/dg_Matrix.R
Matrix/tests/dpo-test.R
Matrix/tests/dtpMatrix.R
Matrix/tests/factorizing.R
Matrix/tests/group-methods.R
Matrix/tests/indexing.R
Matrix/tests/indexing.Rout.save
Matrix/tests/matprod.R
Matrix/tests/matr-exp.R
Matrix/tests/other-pkgs.R
Matrix/tests/spModel.matrix.R
Matrix/tests/validObj.R
Matrix/tests/write-read.R
Matrix/vignettes
Matrix/vignettes/Comparisons.Rnw
Matrix/vignettes/Design-issues.Rnw
Matrix/vignettes/Intro2Matrix.Rnw
Matrix/vignettes/Introduction.Rnw
Matrix/vignettes/Matrix.bib
Matrix/vignettes/fullpage.sty
Matrix/vignettes/myVignette.sty
Matrix/vignettes/sparseModels.Rnw