RLadyBug
Analysis of Infectious Diseases using Stochastic Epidemic Models

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158
Source code
21
Man pages
19
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RLadyBug: Analysis of Infectious Diseases using Stochastic Epidemic Models
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API

API for RLadyBug
Analysis of Infectious Diseases using Stochastic Epidemic Models

Global functions
LBExperiment-class Man page
LBInference-class Man page
LBInferenceMCMC-class Man page
LBInferenceML-class Man page
LBInferenceMLK-class Man page
LBInits Man page
LBInits,LBOptions-method Man page
LBInits<- Man page
LBInits<-,LBOptions-method Man page
LBLayout-class Man page
LBModel Man page
LBModel,LBOptions-method Man page
LBModel<- Man page
LBModel<-,LBOptions-method Man page
LBOptions Man page
LBOptions,LBOptions-method Man page
LBOptions,LBOptionsMCMC-method Man page
LBOptions-class Man page
LBOptions<- Man page
LBOptions<-,LBOptions-method Man page
LBOptions<-,LBOptionsMCMC-method Man page
LBOptionsMCMC-class Man page
LBOptionsML-class Man page
R0 Man page
R0,LBInferenceMCMC-method Man page
R0,LBInferenceML-method Man page
RLadyBug Man page
RLadyBug-package Man page
RLadyBug.options Man page
abakaliki Man page
abakaliki.opts Man page
algo Man page
algo,LBOptionsMCMC-method Man page
algo<- Man page
algo<-,LBOptionsMCMC-method Man page
csfv Man page
csfv.opts Man page
csfvML Man page
csfvML.opts Man page
csfvTDprior Man page
csfvTDprior.opts Man page
data2events Man page
data2events,LBExperiment-method Man page
draw.bar Source code
draw.slice Source code
exp2interval Source code
hksars Man page
hksars.opts.ml Man page
ignoreData Man page
ignoreData,LBOptions-method Man page
ignoreData<- Man page
ignoreData<-,LBOptions-method Man page
infValues Man page
infValues,LBInference-method Man page
infValues,LBInferenceMCMC-method Man page
infValues,LBInferenceML-method Man page
infValues,LBInferenceMLK-method Man page
infValues<- Man page
infValues<-,LBInference-method Man page
infValues<-,LBInferenceMCMC-method Man page
infValues<-,LBInferenceML-method Man page
infValues<-,LBInferenceMLK-method Man page
initBeta Man page
initBeta,LBOptions-method Man page
initBeta<- Man page
initBeta<-,LBOptions-method Man page
initBetaN Man page
initBetaN,LBOptions-method Man page
initBetaN<- Man page
initBetaN<-,LBOptions-method Man page
initDia Man page
initDia,LBOptions-method Man page
initDia<- Man page
initDia<-,LBOptions-method Man page
initIncu Man page
initIncu,LBOptions-method Man page
initIncu<- Man page
initIncu<-,LBOptions-method Man page
initInf Man page
initInf,LBOptions-method Man page
initInf<- Man page
initInf<-,LBOptions-method Man page
initialize,LBInferenceMCMC-method Man page
initialize,LBOptions-method Man page
initsAsDataFrame Man page
initsAsDataFrame,LBOptions-method Man page
kde2dplot Source code
ladybugExample Man page Source code
laevens Man page
laevens.opts Man page
laevens.opts.mcmc Man page
laevensML Man page
laevensML.opts Man page
layoutAsDataFrame Man page
layoutAsDataFrame,LBLayout-method Man page
layoutMatrixes Man page
layoutMatrixes,LBLayout-method Man page
loc2i Source code
loglik.klink Source code
makeLambda2 Source code
makeNeigh Source code
neighbours Source code
oneill Man page
oneill.opts Man page
optionsAsDataFrame Man page
optionsAsDataFrame,LBOptions-method Man page
optionsAsDataFrame,LBOptionsMCMC-method Man page
parseOutputMCMC Source code
parseOutputML Source code
plot,LBExperiment,missing-method Man page
plot,LBExperiment-method Man page
plot,LBInferenceMCMC,missing-method Man page
preprocess Source code
preprocess.spacetime Source code
r0 Source code
randomWalk Man page
randomWalk,LBOptionsMCMC-method Man page
randomWalk<- Man page
randomWalk<-,LBOptionsMCMC-method Man page
readSpecFile Man page Source code
reset.RLadyBug.options Man page
samplePaths Man page
samplePaths,LBInferenceMCMC-method Man page
seed Man page
seed,LBOptions-method Man page
seed<- Man page
seed<-,LBOptions-method Man page
seir Man page Source code
seir.klinkenberg Source code
show,LBExperiment-method Man page
show,LBInference-method Man page
show,LBInferenceMCMC-method Man page
show,LBInferenceML-method Man page
show,LBInferenceMLK-method Man page
show,LBLayout-method Man page
show,LBOptions-method Man page
show,LBOptionsMCMC-method Man page
show,LBOptionsML-method Man page
simulate,LBOptions-method Man page
summary,LBExperiment-method Man page
summary,LBInference-method Man page
summary,LBInferenceMCMC-method Man page
summary,LBInferenceML-method Man page
summary,LBInferenceMLK-method Man page
summary,LBLayout-method Man page
summary,LBOptions-method Man page
summary,LBOptionsMCMC-method Man page
summary,LBOptionsML-method Man page
writeDataFile Source code
writeDataFileSim Source code
writeFirstPartOfDataFile Source code
writeLastPartOfDataFile Source code
writeOptionFile Man page
writeOptionFile,LBOptionsMCMC-method Man page
writeOptionFile,LBOptionsML-method Man page
RLadyBug documentation built on May 2, 2019, 5:50 p.m.

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