SpecLibDolphin2011: Mass Spectral Library Dolphin Blubber 2011
Version 0.5-3

Contains the code and mass spectral library described in: Nontargeted Comprehensive Two-Dimensional Gas Chromatography/Time-of-Flight Mass Spectrometry Method and Software for Inventorying Persistent and Bioaccumulative Contaminants in Marine Environments, Environmental Science and Technology, 2012, 46, 8001-8008. DOI: 10.1021/es301139q. The sample is blubber from a common dolphin (Delphinus delphis) fatally stranded January 2006 in Orleans, Massachusetts.

Browse man pages Browse package API and functions Browse package files

AuthorNathan G. Dodder, with study authors Eunha Hoh, Steven J. Lehotay, Kristin C. Pangallo, Christopher M. Reddy, and Keith A. Maruya.
Date of publication2013-05-18 22:07:06
MaintainerNathan Dodder <nathand@sccwrp.org>
LicenseBSD_2_clause + file LICENSE
Version0.5-3
URL http://orgmassspecr.r-forge.r-project.org/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("SpecLibDolphin2011", repos="http://R-Forge.R-project.org")

Man pages

dolphin2011.spec: Package data.
LibraryReport: Mass Spectral Library Report
MakeTable: Make summary table
PlotClasses: Plot 2D Chromatograms
SpecLibDolphin2011-package: Mass Spectral Library Dolphin Blubber 2011

Functions

LibraryReport Man page Source code
MakeTable Man page Source code
PlotClasses Man page Source code
SpecLibDolphin2011-package Man page
dolphin2011.meta Man page
dolphin2011.spec Man page

Files

DESCRIPTION
LICENSE
NAMESPACE
R
R/LibraryReport.R
R/MakeTable.R
R/PlotClasses.R
data
data/datalist
data/dolphin2011.meta.csv.gz
data/dolphin2011.spec.csv.gz
inst
inst/doc
inst/doc/SpecLibDolphin2011_instructions.pdf
inst/extdata
inst/extdata/struct
inst/extdata/struct/2_coeluting_hydroxychlordene_69653754.png
inst/extdata/struct/3Br_MeOBDE.png
inst/extdata/struct/3Br_PBDE.png
inst/extdata/struct/3Br_PBHD.png
inst/extdata/struct/3Cl_PCS.png
inst/extdata/struct/4Br_2MeOBB80.png
inst/extdata/struct/4Br_DMBP_isomer_1.png
inst/extdata/struct/4Br_DMBP_isomer_2.png
inst/extdata/struct/4Br_MBP.png
inst/extdata/struct/4Br_MeOBDE47_isomer_3.png
inst/extdata/struct/4Br_MeOBDE68_isomer_2.png
inst/extdata/struct/4Br_MeOBDE_isomer_1.png
inst/extdata/struct/4Br_PBB_isomer_1.png
inst/extdata/struct/4Br_PBB_isomer_2.png
inst/extdata/struct/4Br_PBDE_isomer_1.png
inst/extdata/struct/4Br_PBDE_isomer_2.png
inst/extdata/struct/4Br_PBDE_isomer_3.png
inst/extdata/struct/4Br_PBDE_isomer_4.png
inst/extdata/struct/4Br_PBHD.png
inst/extdata/struct/4Cl_PCS_isomer_1.png
inst/extdata/struct/4Cl_PCS_isomer_2.png
inst/extdata/struct/4Cl_PCS_isomer_3.png
inst/extdata/struct/4Cl_PCS_isomer_4.png
inst/extdata/struct/5Br_DMBP_isomer_1.png
inst/extdata/struct/5Br_DMBP_isomer_2.png
inst/extdata/struct/5Br_DMBP_isomer_3.png
inst/extdata/struct/5Br_MBP_isomer_1.png
inst/extdata/struct/5Br_MBP_isomer_2.png
inst/extdata/struct/5Br_MBP_isomer_3.png
inst/extdata/struct/5Br_MBP_isomer_4.png
inst/extdata/struct/5Br_MeOBDE_isomer_1.png
inst/extdata/struct/5Br_MeOBDE_isomer_2.png
inst/extdata/struct/5Br_MeOBDE_isomer_3.png
inst/extdata/struct/5Br_PBB_isomer_1.png
inst/extdata/struct/5Br_PBB_isomer_2.png
inst/extdata/struct/5Br_PBDE_isomer_1.png
inst/extdata/struct/5Br_PBDE_isomer_2.png
inst/extdata/struct/5Br_PBDE_isomer_3.png
inst/extdata/struct/5Cl_PCDE.png
inst/extdata/struct/5Cl_PCS_isomer_1.png
inst/extdata/struct/5Cl_PCS_isomer_2.png
inst/extdata/struct/5Cl_PCS_isomer_3.png
inst/extdata/struct/5Cl_PCS_isomer_4.png
inst/extdata/struct/6Br_DMBP.png
inst/extdata/struct/6Br_MBP_isomer_1.png
inst/extdata/struct/6Br_MBP_isomer_2.png
inst/extdata/struct/6Br_MBP_isomer_3.png
inst/extdata/struct/6Br_MBP_isomer_4.png
inst/extdata/struct/6Br_PBB_isomer_1.png
inst/extdata/struct/6Br_PBB_isomer_2.png
inst/extdata/struct/6Br_PBB_isomer_3.png
inst/extdata/struct/6Br_PBB_isomer_4.png
inst/extdata/struct/6Br_PBB_isomer_5.png
inst/extdata/struct/6Br_PBB_isomer_6.png
inst/extdata/struct/6Br_PBDE_isomer_1.png
inst/extdata/struct/6Br_PBDE_isomer_2.png
inst/extdata/struct/6Br_PBDE_isomer_3.png
inst/extdata/struct/6Br_PBDE_isomer_4.png
inst/extdata/struct/6Br_PBDE_isomer_5.png
inst/extdata/struct/6Cl_MBP_isomer_1.png
inst/extdata/struct/6Cl_MBP_isomer_2.png
inst/extdata/struct/6Cl_PCDE_isomer_1.png
inst/extdata/struct/6Cl_PCDE_isomer_2.png
inst/extdata/struct/6Cl_PCDE_isomer_3.png
inst/extdata/struct/6Cl_PCDE_isomer_4.png
inst/extdata/struct/6Cl_PCS_isomer_1.png
inst/extdata/struct/6Cl_PCS_isomer_2.png
inst/extdata/struct/6Cl_PCS_isomer_3.png
inst/extdata/struct/7Br_MBP.png
inst/extdata/struct/7Br_PBDE_isomer_1.png
inst/extdata/struct/7Br_PBDE_isomer_2.png
inst/extdata/struct/7Br_PBDE_isomer_3.png
inst/extdata/struct/7Cl_MBP.png
inst/extdata/struct/7Cl_MeOCDE.png
inst/extdata/struct/7Cl_PCDE_isomer_1.png
inst/extdata/struct/7Cl_PCDE_isomer_2.png
inst/extdata/struct/7Cl_PCDE_isomer_3.png
inst/extdata/struct/7Cl_PCDE_isomer_4.png
inst/extdata/struct/7Cl_PCDE_isomer_5.png
inst/extdata/struct/7Cl_PCDE_isomer_6.png
inst/extdata/struct/7Cl_PCDE_isomer_7.png
inst/extdata/struct/7Cl_PCDE_isomer_8.png
inst/extdata/struct/7Cl_PCS_isomer_1.png
inst/extdata/struct/7Cl_PCS_isomer_2.png
inst/extdata/struct/7Cl_PCS_isomer_3.png
inst/extdata/struct/8Cl_MeOCDE_isomer_1.png
inst/extdata/struct/8Cl_MeOCDE_isomer_2.png
inst/extdata/struct/8Cl_PCDE_isomer_1.png
inst/extdata/struct/8Cl_PCDE_isomer_2.png
inst/extdata/struct/8Cl_PCS.png
inst/extdata/struct/Br2Cl4_DMBP.png
inst/extdata/struct/Br3Cl2_DMBP.png
inst/extdata/struct/Br3Cl_BCDE_isomer_1.png
inst/extdata/struct/Br3Cl_BCDE_isomer_2.png
inst/extdata/struct/Br3Cl_MBP.png
inst/extdata/struct/Br4Cl2_DMBP.png
inst/extdata/struct/Br4Cl2_MBP_isomer_1.png
inst/extdata/struct/Br4Cl2_MBP_isomer_2.png
inst/extdata/struct/Br4Cl_BCDE.png
inst/extdata/struct/Br4Cl_MBP_isomer_1.png
inst/extdata/struct/Br4Cl_MBP_isomer_2.png
inst/extdata/struct/Br4Cl_MBP_isomer_3.png
inst/extdata/struct/Br4Cl_MBP_isomer_4.png
inst/extdata/struct/Br4Cl_MBP_isomer_5.png
inst/extdata/struct/Br4Cl_MBP_isomer_6.png
inst/extdata/struct/Br5Cl2_MBP.png
inst/extdata/struct/Br5Cl_BCDE_isomer_1.png
inst/extdata/struct/Br5Cl_BCDE_isomer_2.png
inst/extdata/struct/Br5Cl_BCDE_isomer_3.png
inst/extdata/struct/Br5Cl_BCDE_isomer_4.png
inst/extdata/struct/Br5Cl_DMBP.png
inst/extdata/struct/Br5Cl_MBP_isomer_1.png
inst/extdata/struct/Br5Cl_MBP_isomer_2.png
inst/extdata/struct/Br5Cl_MBP_isomer_3.png
inst/extdata/struct/Br5Cl_MBP_isomer_4.png
inst/extdata/struct/Br6Cl_MBP.png
inst/extdata/struct/DDE_isomer_1.png
inst/extdata/struct/DDE_isomer_2.png
inst/extdata/struct/DDEt.png
inst/extdata/struct/DDM.png
inst/extdata/struct/DDMU.png
inst/extdata/struct/DDT_related_1.png
inst/extdata/struct/DDT_related_2.png
inst/extdata/struct/DDT_related_3.png
inst/extdata/struct/HCH_isomer_1.png
inst/extdata/struct/HCH_isomer_2.png
inst/extdata/struct/HCH_isomer_3.png
inst/extdata/struct/TCPM_isomer_1.png
inst/extdata/struct/TCPM_isomer_2.png
inst/extdata/struct/alpha_chlordane.png
inst/extdata/struct/bromoindole.png
inst/extdata/struct/chlordane_related_10.png
inst/extdata/struct/chlordane_related_11.png
inst/extdata/struct/chlordane_related_12.png
inst/extdata/struct/chlordane_related_13.png
inst/extdata/struct/chlordane_related_14.png
inst/extdata/struct/chlordane_related_5.png
inst/extdata/struct/chlordane_related_6.png
inst/extdata/struct/chlordane_related_7.png
inst/extdata/struct/chlordane_related_8.png
inst/extdata/struct/chlordane_related_9.png
inst/extdata/struct/cis_nonachlor.png
inst/extdata/struct/dibromoindole_isomer_1.png
inst/extdata/struct/dibromoindole_isomer_2.png
inst/extdata/struct/dieldrin.png
inst/extdata/struct/gamma_chlordane.png
inst/extdata/struct/gamma_chlordene.png
inst/extdata/struct/heptachlor.png
inst/extdata/struct/heptachlor_epoxide.png
inst/extdata/struct/heptachlor_related_1.png
inst/extdata/struct/heptachlor_related_2.png
inst/extdata/struct/heptachlor_related_3.png
inst/extdata/struct/hexachloro_ethylbenzene.png
inst/extdata/struct/hexachlorobenzene.png
inst/extdata/struct/methoxy_DE_Br3Cl.png
inst/extdata/struct/methoxy_DE_Br4Cl.png
inst/extdata/struct/mirex.png
inst/extdata/struct/mirex2Cl.png
inst/extdata/struct/mirexCl_isomer_1.png
inst/extdata/struct/mirexCl_isomer_2.png
inst/extdata/struct/opDDD.png
inst/extdata/struct/oxychlordane.png
inst/extdata/struct/pentachlorobenzene.png
inst/extdata/struct/pentachloroethylbenzene.png
inst/extdata/struct/ppDDD.png
inst/extdata/struct/ppDDE.png
inst/extdata/struct/ppDDT.png
inst/extdata/struct/tetraphenyltin.png
inst/extdata/struct/trans_nonachlor.png
inst/extdata/struct/tribromoanisole.png
inst/extdata/struct/tribromophenol.png
inst/extdata/struct/unknown_5.png
man
man/LibraryReport.Rd
man/MakeTable.Rd
man/PlotClasses.Rd
man/SpecLibDolphin2011-package.Rd
man/dolphin2011.spec.Rd
SpecLibDolphin2011 documentation built on May 21, 2017, 1:09 a.m.