Man pages for SuperCurve
RPPA Analysis Package
| sc00-SuperCurve-package | Reverse phase protein lysate array analysis |
| sc01-RPPA-class | Class "RPPA" |
| sc02-RPPADesign-class | Class "RPPADesign" and Class "RPPADesignParams" |
| sc05-RPPAFit-class | Class "RPPAFit" |
| sc06-RPPAFitParams-class | Fitting Dilution Curves to Protein Lysate Arrays with Class... |
| sc07-FitClass-class | Class "FitClass" |
| sc08-LogisticFitClass-class | Class "LogisticFitClass" |
| sc09-CobsFitClass-class | Class "CobsFitClass" |
| sc10-LoessFitClass-class | Class "LoessFitClass" |
| sc11-RPPASet-class | Class "RPPASet" |
| sc12-RPPASetSummary-class | Class "RPPASetSummary" |
| sc13-getConfidenceInterval | Compute Confidence Intervals for a Model Fit to Dilution... |
| sc14-spatialCorrection | Spatial Correction |
| sc15-normalize | Normalization |
| sc19-RPPANormalizationParams-class | Class "RPPANormalizationParams" |
| sc20-RPPASpatialParams-class | Class "RPPASpatialParams" |
| sc21-RPPAPreFitQC-class | Class "RPPAPreFitQC" |
| sc22-DS5RPPAPreFitQC-class | Class "DS5RPPAPreFitQC" |
| sc70-rppaCell-data | AKT, ERK2, and CTNNB1 expression in cell lines |
| sc70-rppaSingleSubgrid-data | FOO, BAR, PLUGH, and WALDO expression |
| sc70-rppaTriple-data | ACTB, CAS3, FAK, and ODC1 expression in 14 fed/starved cell... |
| sc70-rppaTumor-data | ERK2, GSK3, and JNK expression in tumor samples |
| sc80-registerModel | Model Registration Methods |
| sc80-registerNormalizationMethod | Normalization Method Registration Methods |
| sc90-registrationMethods | Generic Registration Methods |
| sc98-BoundedRange-class | Class "BoundedRange" |
| sc98-DefaultProgressMonitor-class | Class "DefaultProgressMonitor" |
| sc98-Directory-class | Class "Directory" |
| sc98-ElapsedTime-class | Class "ElapsedTime" |
| sc98-ProgressMonitor-class | Class "ProgressMonitor" |
| sc98-ProgressMonitor-methods | Methods for Manipulating Progress Monitors |
| sc98-SCProgressMonitor-class | Class "SCProgressMonitor" |
| sc98-SCProgressMonitor-methods | Methods for Manipulating SuperCurve Progress Models |
| sc98-SuperCurveSettings-class | Class "SuperCurveSettings" |
| sc99-elapsed-method | Method "elapsed" |
| sc99-normalize-method | Method "normalize" |
| sc99-paramString-method | Method "paramString" |
| sc99-qcprob-method | Method "qcprob" |
| sc99-write.summary-method | Method "write.summary" |
