API for TAPS
Tumor Abberation Prediction Suite
| Global functions | |
|---|---|
| .onLoad | Source code |
| OverviewPlot | Source code |
| TAPS | Man page |
| TAPS.call | Man page |
| TAPS.click | Man page |
| TAPS.estimates | Man page |
| TAPS.freq | Man page |
| TAPS.plot | Man page |
| TAPS.region | Man page |
| TAPS_call | Man page Source code |
| TAPS_click | Man page Source code |
| TAPS_compare | Man page Man page Man page Man page Source code |
| TAPS_estimates | Man page Source code |
| TAPS_freq | Man page Source code |
| TAPS_plot | Man page Source code |
| TAPS_region | Man page Source code |
| Taps.call | Man page |
| Taps.click | Man page |
| Taps.estimates | Man page |
| Taps.freq | Man page |
| Taps.plot | Man page |
| Taps.region | Man page |
| Taps_call | Man page |
| Taps_click | Man page |
| Taps_estimates | Man page |
| Taps_freq | Man page |
| Taps_plot | Man page |
| Taps_region | Man page |
| addGenes | Source code |
| chromFix | Source code |
| chrom_n | Source code |
| chrom_ucsc | Source code |
| clickWrap | Source code |
| clicker | Source code |
| compare_regionSet | Source code |
| copyNumberClicker | Source code |
| deChrom_ucsc | Source code |
| drawImage | Source code |
| equals | Source code |
| findCNs | Source code |
| getEstimates | Source code |
| getGenes | Source code |
| getOverlap | Source code |
| getSubdirs | Source code |
| is.autosome | Source code |
| is.even | Source code |
| is.odd | Source code |
| karyotype_check | Source code |
| karyotype_chroms | Source code |
| karyotype_chromsCN | Source code |
| load.txt | Source code |
| makeRegions | Source code |
| myMeans | Source code |
| mySorter | Source code |
| neighbour | Source code |
| nrows | Source code |
| pileup | Source code |
| pileup_copies | Source code |
| pileup_dif | Source code |
| pileup_pos | Source code |
| probesInRegions | Source code |
| pvals | Source code |
| readAlf | Source code |
| readLog2 | Source code |
| readSegments | Source code |
| returnSkippedValues | Source code |
| save.txt | Source code |
| segMatch | Source code |
| segment_DNAcopy | Source code |
| setCNs | Source code |
| subplot | Source code |
| sum_regionSet | Source code |
| thisSubdir | Source code |
| vectorMatch | Source code |
| vplayout | Source code |
| weightedMean | Source code |
| weightedMedian | Source code |
