VarSelLCM: Variable Selection for Model-Based Clustering of Continuous, Count, Categorical or Mixed-Type Data Set with Missing Values

Variable Selection for model-based clustering managed by the Latent Class Model. This model analyses mixed-type data (data with continuous and/ or count and/or categorical variables) with missing values (missing at random) by assuming independence between classes. The one-dimensional marginals of the components follow standard distributions for facilitating both the model interpretation and the model selection. The variable selection is led by an alternated optimization procedure for maximizing the MICL criterion. The maximum likelihood inference is done by an EM algorithm for the selected model. This package also performs the imputation of missing values by taking the expectation of the missing values conditionally on the model, its parameters and on the observed variables.

AuthorMatthieu Marbac and Mohammed Sedki
Date of publication2016-07-13 15:42:57
MaintainerMohammed Sedki <mohammed.sedki@u-psud.fr>
LicenseGPL (>= 2)
Version2.0
http://varsellcm.r-forge.r-project.org/

View on R-Forge

Functions

summary Man page
summary,VSLCMresultsContinuous-method Man page
VarSelCluster Man page
VarSelLCM Man page
VarSelLCM-package Man page
VSLCMcriteria-class Man page
VSLCMmodel-class Man page
VSLCMparamCategorical-class Man page
VSLCMparamContinuous-class Man page
VSLCMparamInteger-class Man page
VSLCMparamMixed-class Man page
VSLCMpartitions-class Man page
VSLCMresultsCategorical-class Man page
VSLCMresultsContinuous-class Man page
VSLCMresultsInteger-class Man page
VSLCMresultsMixed-class Man page
VSLCMstrategy-class Man page

Files

VarSelLCM/DESCRIPTION
VarSelLCM/NAMESPACE
VarSelLCM/R
VarSelLCM/R/CheckInputs.R VarSelLCM/R/DataCstr.R VarSelLCM/R/DesignOutput.R VarSelLCM/R/ICLexact.R VarSelLCM/R/Imputation.R VarSelLCM/R/Plot.R VarSelLCM/R/Print.R VarSelLCM/R/RcppExports.R VarSelLCM/R/Summary.R VarSelLCM/R/VSLCMGrlClasses.R VarSelLCM/R/VarSelLCM.R VarSelLCM/R/withoutmixture.R
VarSelLCM/data
VarSelLCM/data/SimulHetero.rda
VarSelLCM/data/golub.rda
VarSelLCM/data/heart.rda
VarSelLCM/data/hepatitis.rda
VarSelLCM/data/thyroid.rda
VarSelLCM/inst
VarSelLCM/inst/include
VarSelLCM/inst/include/Algorithm.h
VarSelLCM/inst/include/AlgorithmCategorical.h
VarSelLCM/inst/include/AlgorithmContinuous.h
VarSelLCM/inst/include/AlgorithmInteger.h
VarSelLCM/inst/include/AlgorithmMixed.h
VarSelLCM/inst/include/Data.h
VarSelLCM/inst/include/DataCategorical.h
VarSelLCM/inst/include/DataContinuous.h
VarSelLCM/inst/include/DataInteger.h
VarSelLCM/inst/include/DataMixed.h
VarSelLCM/inst/include/Param.h
VarSelLCM/inst/include/ParamCategorical.h
VarSelLCM/inst/include/ParamContinuous.h
VarSelLCM/inst/include/ParamInteger.h
VarSelLCM/inst/include/ParamMixed.h
VarSelLCM/inst/include/XEM.h
VarSelLCM/inst/include/XEMCategorical.h
VarSelLCM/inst/include/XEMContinuous.h
VarSelLCM/inst/include/XEMInteger.h
VarSelLCM/inst/include/XEMMixed.h
VarSelLCM/inst/include/XEMPen.h
VarSelLCM/man
VarSelLCM/man/VSLCMcriteria-class.Rd VarSelLCM/man/VSLCMmodel-class.Rd VarSelLCM/man/VSLCMparamCategorical-class.Rd VarSelLCM/man/VSLCMparamContinuous-class.Rd VarSelLCM/man/VSLCMparamInteger-class.Rd VarSelLCM/man/VSLCMparamMixed-class.Rd VarSelLCM/man/VSLCMpartitions-class.Rd VarSelLCM/man/VSLCMresultsCategorical-class.Rd VarSelLCM/man/VSLCMresultsContinuous-class.Rd VarSelLCM/man/VSLCMresultsInteger-class.Rd VarSelLCM/man/VSLCMresultsMixed-class.Rd VarSelLCM/man/VSLCMstrategy-class.Rd VarSelLCM/man/VarSelCluster.Rd VarSelLCM/man/VarSelLCM-package.Rd VarSelLCM/man/summary-methods.Rd
VarSelLCM/src
VarSelLCM/src/Algorithm.cpp
VarSelLCM/src/AlgorithmCategorical.cpp
VarSelLCM/src/AlgorithmContinuous.cpp
VarSelLCM/src/AlgorithmInteger.cpp
VarSelLCM/src/AlgorithmMixed.cpp
VarSelLCM/src/DataCategorical.cpp
VarSelLCM/src/DataContinuous.cpp
VarSelLCM/src/DataInteger.cpp
VarSelLCM/src/DataMixed.cpp
VarSelLCM/src/Makevars
VarSelLCM/src/Makevars.win
VarSelLCM/src/ParamCategorical.cpp
VarSelLCM/src/ParamContinuous.cpp
VarSelLCM/src/ParamInteger.cpp
VarSelLCM/src/ParamMixed.cpp
VarSelLCM/src/RcppExports.cpp
VarSelLCM/src/VarSelLCMmixte.cpp
VarSelLCM/src/XEM.cpp
VarSelLCM/src/XEMCategorical.cpp
VarSelLCM/src/XEMContinuous.cpp
VarSelLCM/src/XEMInteger.cpp
VarSelLCM/src/XEMMixed.cpp
VarSelLCM/src/XEMPen.cpp

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