barebone: Multivariate Methods in Ecology with R: Basic Algorithms

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An educational package to explain the basic algorithms of common ordination methods. The functions in this package are not made for production use, but only to give an insight into barebone methods. Not for faint at heart.

Author
Peter Solymos, Jari Oksanen and Bela Tothmeresz
Date of publication
2010-09-20 06:57:32
Maintainer
Peter Solymos <solymos@ualberta.ca>
License
GPL-2
Version
1.0-4
URLs

View on R-Forge

Man pages

CA
Correspondence Analysis
CAdist
Correspondence Analysis
CAeig
Correspondence Analysis
CAwa1
Correspondence Analysis.
CCAwa1
Constrained Correspondence Analysis.
dbRDA
Distance-based Redundancy Analysis
NMDS
Nonmetric Multidimensional Scaling
PCA
Principal Components Analysis
PCAeig
Principal Components Analysis
PCApot1
Principal Component Analysis
pCCA
[Partial] [Constrained] Correspondence Analysis.
PCoA
Principal Coordinates Analysis
pRDA
[Partial] Redundancy Analysis and Principal Components...
RDA
Redundancy Analysis
wPCoA
Weighted Principal Coordinate Analysis

Files in this package

barebone/DESCRIPTION
barebone/NAMESPACE
barebone/R
barebone/R/CA.R
barebone/R/CAdist.R
barebone/R/CAeig.R
barebone/R/CAwa1.R
barebone/R/CCAwa1.R
barebone/R/NMDS.R
barebone/R/PCA.R
barebone/R/PCAeig.R
barebone/R/PCApot1.R
barebone/R/PCoA.R
barebone/R/RDA.R
barebone/R/dbRDA.R
barebone/R/pCCA.R
barebone/R/pRDA.R
barebone/R/pRDAalt.R
barebone/R/wPCoA.R
barebone/inst
barebone/inst/doc
barebone/inst/doc/Makefile
barebone/inst/doc/Sweave.sty
barebone/inst/doc/barebone.Rnw
barebone/inst/doc/basicmethods.tex
barebone/inst/doc/mmecor.bib
barebone/inst/doc/mmecor.sty
barebone/inst/doc/spbasic.bst
barebone/inst/doc/svmono.cls
barebone/man
barebone/man/CA.Rd
barebone/man/CAdist.Rd
barebone/man/CAeig.Rd
barebone/man/CAwa1.Rd
barebone/man/CCAwa1.Rd
barebone/man/NMDS.Rd
barebone/man/PCA.Rd
barebone/man/PCAeig.Rd
barebone/man/PCApot1.Rd
barebone/man/PCoA.Rd
barebone/man/RDA.Rd
barebone/man/dbRDA.Rd
barebone/man/pCCA.Rd
barebone/man/pRDA.Rd
barebone/man/wPCoA.Rd