cgmisc: Various functions useful in computational genetics, e.g. GWAS.
Version 2.0

Package contains various functions useful in computational genetics, e.g. in genome-wide association studies.

AuthorMarcin Kierczak <marcin.kierczak@slu.se>
Date of publication2013-04-17 11:32:57
MaintainerMarcin Kierczak <marcin.kierczak@slu.se>
LicenseGPL (>=2.10)
Version2.0
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("cgmisc", repos="http://R-Forge.R-project.org")

Getting started

Package overview

Popular man pages

cgmisc-package: Various functions useful in computational genetics
clump.markers: Clump markers according to their LD
compute.Fstats: Compute Fst fixation index for two populations
fstats.result: The 'fstats.result' class
plot.manhattan.LD: Plot LD pattern and MAF in a Manhattan plot
See all...

All man pages Function index File listing

Man pages

cgmisc-package: Various functions useful in computational genetics
clump.markers: Clump markers according to their LD
compute.Fstats: Compute Fst fixation index for two populations
fstats.result: The 'fstats.result' class
plot.manhattan.LD: Plot LD pattern and MAF in a Manhattan plot

Functions

Files

DESCRIPTION
NAMESPACE
R
R/clump.markers.R
R/compute.Fstats.R
R/fstats.result.R
R/plot.clumps.R
R/plot.manhattan.LD.R
data
data/cgmiscdat1.rda
data/datalist
inst
inst/doc
inst/doc/cgmisc.pdf
man
man/cgmisc-package.Rd
man/clump.markers.Rd
man/compute.Fstats.Rd
man/fstats.result.Rd
man/plot.manhattan.LD.Rd
cgmisc documentation built on May 21, 2017, 2:57 a.m.

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