climtrends: Statistical Methods for Climate Sciences
Version 1.0.6

Absolute homogeneity tests SNHT absolute 1-breaks, 1-break, SD different from 1, 2-breaks, Buishand, Pettitt, von Neumann ratio and ratio-rank, Worsley, and Craddock, Relative homogeneity tests SNHT absolute 1-breaks, 1-break SD different from 1, 2-breaks, Peterson and Easterling, and Vincent, Differences in scale between two groups Siegel–Tukey, Create reference time series mean, weights/correlation, finding outliers Grubbs, ESD, MAD, Tietjen Moore, Hampel, etc.

Browse man pages Browse package API and functions Browse package files

AuthorJose Gama [aut, cre]
Date of publication2016-05-25 15:46:30
MaintainerJose Gama <rxprtgama@gmail.com>
LicenseGPL (>= 3)
Version1.0.6
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("climtrends", repos="http://R-Forge.R-project.org")

Man pages

adjHomogenization: Homogenization adjustment within a certain window
allfilesIEObyPathPattern: Read multiple IEO files
allfileUSGS2timeseries: Read multiple USGS files
annual.precipitation.totals.Madison: Annual precipitation totals in inches Madison (Wisconsin)
BSXFUN: Apply a function to each element of 2 arrays with singleton...
Buishand.Critical.Values: Critical values for the Buishand test
Buishand.range.test: Buishand range absolute homogeneity test
climtrends-internal: Internal RAHRS functions
completeMissingValues.daily.mean: complete missing values on a time series of daily values...
craddock.test: Craddock test
CreateReferenceSeriesFromFiles.mean: Create a reference series (averaging)
create.reference.series.fromfiles.mean.correlations: Create a reference series (averaging weights/correlations)
cumulative.deviations: cumulative deviations test (parametric test for step jump in...
Cumulative.Deviations.Test.Critical.Values: Critical values for Worsley's likelihood ratio test
daily.climatology.from.daily.data: Daily climatology
distribution.free.CUSUM: Distribution Free CUSUM (non-parametric test for step jump in...
ESDstatistic: ESD statistic
fileUSGS2timeseries: Read a a USGS discharge file
FillDailyGapsWithSomeValue: fill missing days with some value
FillYearlyGapsWithSomeValue: fill missing days with some value
findCommonPeriod: Find the common period between several time series
findOutliers.ESD.test: Find outliers based on the ESD test
findOutliers.Grubbs.twosided: Find outliers based on the Grubbs test
findOutliers.hampel: Find outliers based on quantiles
findOutliers.MAD: Find outliers based on the absolute deviation around the...
findOutliers.quant: Find outliers based on quantiles
findOutliers.sd: Find outliers based on quantiles
findOutliers.Tietjen.Moore.test: Find outliers based on the Tietjen Moore test
findOutliers.trimmed.means: Find outliers based on trimmed means
findOutliers.zscore: Find outliers based on the z-score
FirstMonthOfSeason: Get the first/last month of a season
getInfoHomogenization: Useful info from an homogenization test
getNDP: Read data from a Numeric Data Package (NDP) file from GCMD
getshiftvalue: Get peak value and its sign
IsLeapYear: Determine if a year is a leap year
lastDayOfTheMonth: Get the last day of a month
levelSignifMarks: Use symbols to represent the level of significance
list.continuous.days: List the days with continuous data
listHomogStats: List with the years of a probable shift and other info
listHomogTZ: Useful info from an homogenization test
medianCrossing.test: Median Crossing (non-parametric test for randomness)
monthly.anomalies.from.daily.data: Monthly anomalies
monthly.climatology.from.daily.data: Monthly climatology
MonthlyFuncFromDay: Monthly values converted from daily values
MonthTrendYearsFuncFromDay: Monthly values converted from daily values
peaksP: Use symbols to represent the level of significance
Pettitt.Critical.Values: Critical values for the Pettitt test
Pettitt.test: Pettitt test
plotHomog: Plot the graphics for many homogenization methods
plotSeriesAndRefSimple: Plot a series and one or more reference series
plotSeriesDifference: Plot the difference between 2 series
rank.difference.test: Rank Difference test (non-parametric test for randomness)
rank.sum.test: Rank Sum test
Rank.Von.Neumann.Ratio.Test.Critical.Values: Critical values for the Rank Von-Neumann Ratio Test
readclimexp.knmi.nl: Read KNMI Climate Explorer files
readclimexp.knmi.nl.12month: Read monthly values KNMI Climate Explorer files
readCRDEC: Read GHCN-D files
readECAdata: Read data from a ECA data file
readEtmgegFile: Read USHCN files
readGHCNymd: Read GHCN-Daily files
readHERTTAdailyCSV: Read HERTTA files
readHERTTAdmyQdaily: Read HERTTA month+year+Q files
readMeteoSwiss: Read MeteoSwiss files
readndp040stationDat: Read data from a CDIAC data file
readPSMSLmonthly: Read PSMSL files
readUSHCN: Read USHCN files
ReadYearAnd12MonthsData: Read a TAB delimited data file with year and months in...
siegel.tukey: annual mean of the absolute day-to-day differences of DTR...
SNHTabsolute: standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsolute2SDs: standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteDoubleShift: standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteII: standard normal homogeneity test (SNHT) absolute homogeneity...
SNHTabsoluteTrend: standard normal homogeneity test (SNHT) absolute homogeneity...
SNHT.Critical.Values: Critical values for the Pettitt test
SNHTrelative: standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelative2SDs: standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeDoubleShift: standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeII: standard normal homogeneity test (SNHT) relative homogeneity...
SNHTrelativeTrend: standard normal homogeneity test (SNHT) relative homogeneity...
SNHT.TwoDifferentSDs.Critical.Values: Critical values for the standard normal homogeneity test...
SNHT.TwoShifts.Critical.Values: Critical values for the standard normal homogeneity test...
sqplot: Number of elements for a plot to be nearly square
Tietjen.Moore: Tietjen Moore statistic
trimmed.mean: trimmed mean
turning.points.test: Turning Points (non-parametric test for randomness)
ValuesBetween2Dates: Get values between two dates
ValuesBetween2years: Get values between two years
vDTR: annual mean of the absolute day-to-day differences of DTR...
Von.Neumann.ratio: Pettitt test
Von.Neumann.ratio.rank: Von Neumann ratio rank test
Von.Neumann.Ratio.Test.Critical.Values: Critical values for the Von Neumann ratio test
wetDayCount: Get number of wet days
woOp: x without y
Worsley.Likelihood.Ratio: Worsley's Likelihood Ratio test
Worsley.Likelihood.Ratio.Test.Critical.Values: Critical values for Worsley's likelihood ratio test
YearFuncFromDay: Annual values converted from daily values
yearly.average.temperature.Turin.Milan: Yearly average temperature in Turin, Milan

Functions

AdjHomogenization Man page Source code
AllReadUSGS2timeseries Man page Source code
AllfilesIEObyPathPattern Man page Source code
BSXFUN Man page Source code
Buishand.Critical.Values Man page
BuishandRangeTest Man page Source code
CompleteMissingValuesDailyMean Man page Source code
CraddockTest Man page Source code
CreateReferenceSeriesFromFilesMean Man page Source code
CreateReferenceSeriesFromFilesMeanCorrelations Man page Source code
CreateReferenceSeriesFromFilesMeanCorrelationsTwoseries Man page Source code
Cumulative.Deviations.Test.Critical.Values Man page
CumulativeDeviations Man page Source code
CumulativeDeviationsQR Man page Source code
DailyClimatologyFromDailyData Man page Source code
DistributionFreeCUSUM Man page Source code
ESDstatistic Man page Source code
FillDailyGapsWithSomeValue Man page Source code
FillYearlyGapsWithSomeValue Man page Source code
FindCommonPeriod Man page Source code
FindOutliersESDtest Man page Source code
FindOutliersGrubbsOnesidedMax Man page Source code
FindOutliersGrubbsOnesidedMin Man page Source code
FindOutliersGrubbsTwosided Man page Source code
FindOutliersHampel Man page Source code
FindOutliersMAD Man page Source code
FindOutliersModifiedZscore Man page Source code
FindOutliersQuant Man page Source code
FindOutliersSD Man page Source code
FindOutliersTietjenMooreTest Man page Source code
FindOutliersTrimmedMeans Man page Source code
FindOutliersZscore Man page Source code
FirstMonthOfSeason Man page Source code
GetInfoHomogenization Man page Source code
GetNDP Man page Source code
GetShiftValue Man page Source code
IsLeapYear Man page Source code
LastDayOfTheMonth Man page Source code
LastMonthOfSeason Man page Source code
LevelSignifMarks Man page Source code
ListContinuousDays Man page Source code
ListHomogStats Man page Source code
ListHomogTZ Man page Source code
MedianCrossingTest Man page Source code
MonthTrendYearsFuncFromDay Man page Source code
MonthlyAnomaliesFromDailyData Man page Source code
MonthlyClimatologyFromDailyData Man page Source code
MonthlyFuncFromDay Man page Source code
NegCurve Man page Source code
Pettitt.Critical.Values Man page
PettittTest Man page Source code
PlotHomog Man page Source code
PlotSeriesAndRefSimple Man page Source code
PlotSeriesDifference Man page Source code
Rank.Von.Neumann.Ratio.Test.Critical.Values Man page
RankDifferenceTest Man page Source code
RankSumTest Man page Source code
ReadCRDEC Man page Source code
ReadClimexpKnmiNL Man page Source code
ReadClimexpKnmiNL12month Man page Source code
ReadECAdata Man page Source code
ReadECAdataIndexDTR Man page Source code
ReadEtmgegFile Man page Source code
ReadGHCNymd Man page Source code
ReadHERTTAdailyCSV Man page Source code
ReadHERTTAdmyQdaily Man page Source code
ReadMeteoSwiss Man page Source code
ReadNdp040stationDat Man page Source code
ReadNdp040stationData Man page Source code
ReadNdp040stationHistory Man page Source code
ReadNdp040stationInventory Man page Source code
ReadPSMSLmonthly Man page Source code
ReadUSGS2timeseries Man page Source code
ReadUSHCN Man page Source code
ReadYearAnd12MonthsData Man page Source code
SNHT.Critical.Values Man page
SNHT.Critical.Values.Alexandersson1997 Man page
SNHT.TwoDifferentSDs.Critical.Values Man page
SNHT.TwoShifts.Critical.Values Man page
SNHTabsolute Man page Source code
SNHTabsolute2SDs Man page Source code
SNHTabsoluteDoubleShift Man page Source code
SNHTabsoluteII Man page Source code
SNHTabsoluteTrend Man page Source code
SNHTrelative Man page Source code
SNHTrelative2SDs Man page Source code
SNHTrelativeDoubleShift Man page Source code
SNHTrelativeII Man page Source code
SNHTrelativeTrend Man page Source code
SiegelTukey Man page Source code
Sqplot Man page Source code
Subgen Man page Source code
TietjenMoore Man page Source code
TrimmedMean Man page Source code
TurningPointsTest Man page Source code
VDTR Man page Source code
ValuesBetween2Dates Man page Source code
ValuesBetween2years Man page Source code
Von.Neumann.Ratio.Test.Critical.Values Man page
VonNeumannRatio Man page Source code
VonNeumannRatioRank Man page Source code
WetDayCount Man page Source code
Worsley.Likelihood.Ratio.Test.Critical.Values Man page
WorsleyLikelihoodRatio Man page Source code
YearFuncFromDay Man page Source code
YearMeanFromDay Man page Source code
\%w/o\% Man page
annual.precipitation.totals.Madison Man page
localwindow Man page Source code
ndims Man page Source code
peaksP Man page Source code
smgauss Man page Source code
yearly.average.temperature.Turin.Milan Man page

Files

DESCRIPTION
NAMESPACE
R
R/climtrends.R
data
data/Buishand.Critical.Values.rda
data/Cumulative.Deviations.Test.Critical.Values.rda
data/Pettitt.Critical.Values.rda
data/Rank.Von.Neumann.Ratio.Test.Critical.Values.rda
data/SNHT.Critical.Values.Alexandersson1997.rda
data/SNHT.Critical.Values.rda
data/SNHT.TwoDifferentSDs.Critical.Values.rda
data/SNHT.TwoShifts.Critical.Values.rda
data/Von.Neumann.Ratio.Test.Critical.Values.rda
data/Worsley.Likelihood.Ratio.Test.Critical.Values.rda
data/annual.precipitation.totals.Madison.rda
data/yearly.average.temperature.Turin.Milan.rda
demo
demo/00Index
demo/Hampel1.R
demo/Hampel2.R
demo/Hampel3.R
demo/demoCraddockTest.R
demo/demoCumulativeDeviations.R
demo/demoWijngaard2003.R
demo/demoWorsleyLR.R
inst
inst/extdata
inst/extdata/RR_SOUID101991.txt
inst/extdata/SD_SOUID101992.txt
inst/extdata/c_As00_o.txt
inst/extdata/c_Casl_3.txt
inst/extdata/c_Casl_3_ref.txt
inst/extdata/c_Hori2.txt
inst/extdata/c_Kada2.txt
inst/extdata/c_casl_O_3_REF.TXT
inst/extdata/etmgeg_280.txt
inst/extdata/xgdcnCA008201000.dat
man
man/BSXFUN.Rd
man/Buishand.Critical.Values.Rd
man/Buishand.range.test.Rd
man/CreateReferenceSeriesFromFiles.mean.Rd
man/Cumulative.Deviations.Test.Critical.Values.Rd
man/ESDstatistic.Rd
man/FillDailyGapsWithSomeValue.Rd
man/FillYearlyGapsWithSomeValue.Rd
man/FirstMonthOfSeason.Rd
man/IsLeapYear.Rd
man/MonthTrendYearsFuncFromDay.Rd
man/MonthlyFuncFromDay.Rd
man/Pettitt.Critical.Values.Rd
man/Pettitt.test.Rd
man/Rank.Von.Neumann.Ratio.Test.Critical.Values.Rd
man/ReadYearAnd12MonthsData.Rd
man/SNHT.Critical.Values.Rd
man/SNHT.TwoDifferentSDs.Critical.Values.Rd
man/SNHT.TwoShifts.Critical.Values.Rd
man/SNHTabsolute.Rd
man/SNHTabsolute2SDs.Rd
man/SNHTabsoluteDoubleShift.Rd
man/SNHTabsoluteII.Rd
man/SNHTabsoluteTrend.Rd
man/SNHTrelative.Rd
man/SNHTrelative2SDs.Rd
man/SNHTrelativeDoubleShift.Rd
man/SNHTrelativeII.Rd
man/SNHTrelativeTrend.Rd
man/Tietjen.Moore.Rd
man/ValuesBetween2Dates.Rd
man/ValuesBetween2years.Rd
man/Von.Neumann.Ratio.Test.Critical.Values.Rd
man/Von.Neumann.ratio.Rd
man/Von.Neumann.ratio.rank.Rd
man/Worsley.Likelihood.Ratio.Rd
man/Worsley.Likelihood.Ratio.Test.Critical.Values.Rd
man/YearFuncFromDay.Rd
man/adjHomogenization.Rd
man/allfileUSGS2timeseries.Rd
man/allfilesIEObyPathPattern.Rd
man/annual.precipitation.totals.Madison.Rd
man/climtrends-internal.Rd
man/completeMissingValues.daily.mean.Rd
man/craddock.test.Rd
man/create.reference.series.fromfiles.mean.correlations.Rd
man/cumulative.deviations.Rd
man/daily.climatology.from.daily.data.Rd
man/distribution.free.CUSUM.Rd
man/fileUSGS2timeseries.Rd
man/findCommonPeriod.Rd
man/findOutliers.ESD.test.Rd
man/findOutliers.Grubbs.twosided.Rd
man/findOutliers.MAD.Rd
man/findOutliers.Tietjen.Moore.test.Rd
man/findOutliers.hampel.Rd
man/findOutliers.quant.Rd
man/findOutliers.sd.Rd
man/findOutliers.trimmed.means.Rd
man/findOutliers.zscore.Rd
man/getInfoHomogenization.Rd
man/getNDP.Rd
man/getshiftvalue.Rd
man/lastDayOfTheMonth.Rd
man/levelSignifMarks.Rd
man/list.continuous.days.Rd
man/listHomogStats.Rd
man/listHomogTZ.Rd
man/medianCrossing.test.Rd
man/monthly.anomalies.from.daily.data.Rd
man/monthly.climatology.from.daily.data.Rd
man/peaksP.Rd
man/plotHomog.Rd
man/plotSeriesAndRefSimple.Rd
man/plotSeriesDifference.Rd
man/rank.difference.test.Rd
man/rank.sum.test.Rd
man/readCRDEC.Rd
man/readECAdata.Rd
man/readEtmgegFile.Rd
man/readGHCNymd.Rd
man/readHERTTAdailyCSV.Rd
man/readHERTTAdmyQdaily.Rd
man/readMeteoSwiss.Rd
man/readPSMSLmonthly.Rd
man/readUSHCN.Rd
man/readclimexp.knmi.nl.12month.Rd
man/readclimexp.knmi.nl.Rd
man/readndp040stationDat.Rd
man/siegel.tukey.Rd
man/sqplot.Rd
man/trimmed.mean.Rd
man/turning.points.test.Rd
man/vDTR.Rd
man/wetDayCount.Rd
man/woOp.Rd
man/yearly.average.temperature.Turin.Milan.Rd
climtrends documentation built on May 21, 2017, 3:24 a.m.