clusterpathRcpp: Fast agglomerative convex clustering, original Rcpp implementation

Implements the clusterpath, a clustering method in which all the clusters are solutions to a convex optimization problem with fusion penalties. This package uses the original Rcpp bindings to wrap the C++ implementation.

AuthorToby Dylan Hocking
Date of publication2013-02-22 02:43:28
MaintainerToby Dylan Hocking <toby@sg.cs.titech.ac.jp>
LicenseGPL-3
Version1.1

View on R-Forge

Functions

alphacolnames Man page
assign.labels Man page
calcstats Man page
castbreakpoints Man page
cluster3d Man page
clusterings Man page
clusterpath.l1.general Man page
clusterpath.l1.id Man page
clusterpath.l2 Man page
clusterpath.l2.general Man page
clusterpathRcpp-package Man page
cluster.points Man page
cut.clusterpath Man page
cut.clusterpath.labels Man page
cvxcheck Man page
cvxmod.available Man page
cvxmod.cluster Man page
e.exponential Man page
e.exponential.auto Man page
e.usual Man page
e.usual.k Man page
exponential.eigenvectors Man page
fillin Man page
gendata Man page
get.best.eigenvectors Man page
get.old.best Man page
halfmoon.cluster Man page
norm.rand.index Man page
plot2d Man page
plot.clusterpath Man page
plot.l2 Man page
plotpath3d Man page
plotpathmatrix Man page
plot.predictclusterpath Man page
predict.clusterpath Man page
python.command Man page
usual.eigenvectors Man page

Files

clusterpathRcpp
clusterpathRcpp/R
clusterpathRcpp/R/cut.R clusterpathRcpp/R/cvx.R clusterpathRcpp/R/interface.R clusterpathRcpp/R/spectral.R clusterpathRcpp/R/sim.R clusterpathRcpp/R/plot.R clusterpathRcpp/R/compare.R
clusterpathRcpp/exec
clusterpathRcpp/exec/cluster.py
clusterpathRcpp/NAMESPACE
clusterpathRcpp/inst
clusterpathRcpp/inst/cvxmod
clusterpathRcpp/inst/cvxmod/setsbase.py
clusterpathRcpp/inst/cvxmod/simpleatoms.py
clusterpathRcpp/inst/cvxmod/base.py
clusterpathRcpp/inst/cvxmod/util.py
clusterpathRcpp/inst/cvxmod/errors.py
clusterpathRcpp/inst/cvxmod/atoms
clusterpathRcpp/inst/cvxmod/atoms/sqrt.py
clusterpathRcpp/inst/cvxmod/atoms/inv.py
clusterpathRcpp/inst/cvxmod/atoms/log.py
clusterpathRcpp/inst/cvxmod/atoms/lse.py
clusterpathRcpp/inst/cvxmod/atoms/quadform.py
clusterpathRcpp/inst/cvxmod/atoms/logdet.py
clusterpathRcpp/inst/cvxmod/atoms/entropy.py
clusterpathRcpp/inst/cvxmod/atoms/base.py
clusterpathRcpp/inst/cvxmod/atoms/kl.py
clusterpathRcpp/inst/cvxmod/atoms/norm2.py
clusterpathRcpp/inst/cvxmod/atoms/__init__.py
clusterpathRcpp/inst/cvxmod/atoms/square.py
clusterpathRcpp/inst/cvxmod/atoms/power.py
clusterpathRcpp/inst/cvxmod/atoms/exp.py
clusterpathRcpp/inst/cvxmod/atoms/huber.py
clusterpathRcpp/inst/cvxmod/codegen.py
clusterpathRcpp/inst/cvxmod/sets
clusterpathRcpp/inst/cvxmod/sets/simplesets.py
clusterpathRcpp/inst/cvxmod/sets/__init__.py
clusterpathRcpp/inst/cvxmod/symbolic.py
clusterpathRcpp/inst/cvxmod/__init__.py
clusterpathRcpp/DESCRIPTION
clusterpathRcpp/etc
clusterpathRcpp/etc/xptr.R
clusterpathRcpp/etc/animation.R
clusterpathRcpp/etc/moons-sim.R
clusterpathRcpp/man
clusterpathRcpp/man/plot.predictclusterpath.Rd clusterpathRcpp/man/cvxmod.available.Rd clusterpathRcpp/man/norm.rand.index.Rd clusterpathRcpp/man/get.best.eigenvectors.Rd clusterpathRcpp/man/halfmoon.cluster.Rd clusterpathRcpp/man/cut.clusterpath.labels.Rd clusterpathRcpp/man/cvxcheck.Rd clusterpathRcpp/man/fillin.Rd clusterpathRcpp/man/e.usual.Rd clusterpathRcpp/man/clusterpath.l2.general.Rd clusterpathRcpp/man/cvxmod.cluster.Rd clusterpathRcpp/man/clusterpath.l1.id.Rd clusterpathRcpp/man/e.exponential.auto.Rd clusterpathRcpp/man/alphacolnames.Rd clusterpathRcpp/man/get.old.best.Rd clusterpathRcpp/man/clusterpathRcpp-package.Rd clusterpathRcpp/man/gendata.Rd clusterpathRcpp/man/clusterpath.l2.Rd clusterpathRcpp/man/predict.clusterpath.Rd clusterpathRcpp/man/e.exponential.Rd clusterpathRcpp/man/plotpathmatrix.Rd clusterpathRcpp/man/e.usual.k.Rd clusterpathRcpp/man/clusterings.Rd clusterpathRcpp/man/usual.eigenvectors.Rd clusterpathRcpp/man/cluster3d.Rd clusterpathRcpp/man/python.command.Rd clusterpathRcpp/man/calcstats.Rd clusterpathRcpp/man/castbreakpoints.Rd clusterpathRcpp/man/cluster.points.Rd clusterpathRcpp/man/exponential.eigenvectors.Rd clusterpathRcpp/man/plot.clusterpath.Rd clusterpathRcpp/man/plotpath3d.Rd clusterpathRcpp/man/plot2d.Rd clusterpathRcpp/man/clusterpath.l1.general.Rd clusterpathRcpp/man/cut.clusterpath.Rd clusterpathRcpp/man/assign.labels.Rd clusterpathRcpp/man/plot.l2.Rd
clusterpathRcpp/src
clusterpathRcpp/src/l2.cpp
clusterpathRcpp/src/Makevars
clusterpathRcpp/src/l2.h
clusterpathRcpp/src/l1.h
clusterpathRcpp/src/Makevars.win
clusterpathRcpp/src/l1.cpp
clusterpathRcpp/src/interface.cpp
clusterpathRcpp/NEWS

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