clusterpathRcpp: Fast agglomerative convex clustering, original Rcpp implementation
Version 1.1

Implements the clusterpath, a clustering method in which all the clusters are solutions to a convex optimization problem with fusion penalties. This package uses the original Rcpp bindings to wrap the C++ implementation.

Browse man pages Browse package API and functions Browse package files

AuthorToby Dylan Hocking
Date of publication2013-02-22 02:43:28
MaintainerToby Dylan Hocking <toby@sg.cs.titech.ac.jp>
LicenseGPL-3
Version1.1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("clusterpathRcpp", repos="http://R-Forge.R-project.org")

Man pages

alphacolnames: alphacolnames
assign.labels: assign labels
calcstats: calcstats
castbreakpoints: castbreakpoints
cluster3d: cluster3d
clusterings: clusterings
clusterpath.l1.general: clusterpath l1 general
clusterpath.l1.id: clusterpath l1 id
clusterpath.l2: clusterpath l2
clusterpath.l2.general: clusterpath l2 general
clusterpathRcpp-package: Fast agglomerative convex clustering, original Rcpp...
cluster.points: cluster points
cut.clusterpath: cut clusterpath
cut.clusterpath.labels: cut clusterpath labels
cvxcheck: cvxcheck
cvxmod.available: cvxmod available
cvxmod.cluster: cvxmod cluster
e.exponential: e exponential
e.exponential.auto: e exponential auto
e.usual: e usual
e.usual.k: e usual k
exponential.eigenvectors: exponential eigenvectors
fillin: fillin
gendata: gendata
get.best.eigenvectors: get best eigenvectors
get.old.best: get old best
halfmoon.cluster: halfmoon cluster
norm.rand.index: norm rand index
plot2d: plot2d
plot.clusterpath: plot clusterpath
plot.l2: plot l2
plotpath3d: plotpath3d
plotpathmatrix: plotpathmatrix
plot.predictclusterpath: plot predictclusterpath
predict.clusterpath: predict clusterpath
python.command: python command
usual.eigenvectors: usual eigenvectors

Functions

alphacolnames Man page Source code
assign.labels Man page Source code
calcstats Man page Source code
castbreakpoints Man page
cluster.points Man page
cluster3d Man page
clusterings Man page
clusterpath.l1.general Man page
clusterpath.l1.id Man page
clusterpath.l2 Man page
clusterpath.l2.general Man page
clusterpathRcpp-package Man page
cut.clusterpath Man page Source code
cut.clusterpath.labels Man page Source code
cvxcheck Man page
cvxmod.available Man page Source code
cvxmod.cluster Man page
e.exponential Man page Source code
e.exponential.auto Man page Source code
e.usual Man page Source code
e.usual.k Man page Source code
exponential.eigenvectors Man page Source code
fillin Man page Source code
gendata Man page Source code
get.best.eigenvectors Man page
get.old.best Man page Source code
halfmoon.cluster Man page Source code
norm.rand.index Man page Source code
plot.clusterpath Man page
plot.l2 Man page Source code
plot.predictclusterpath Man page Source code
plot2d Man page
plotpath3d Man page
plotpathmatrix Man page
predict.clusterpath Man page Source code
python.command Man page Source code
usual.eigenvectors Man page Source code

Files

R
R/cut.R
R/cvx.R
R/interface.R
R/spectral.R
R/sim.R
R/plot.R
R/compare.R
exec
exec/cluster.py
NAMESPACE
inst
inst/cvxmod
inst/cvxmod/setsbase.py
inst/cvxmod/simpleatoms.py
inst/cvxmod/base.py
inst/cvxmod/util.py
inst/cvxmod/errors.py
inst/cvxmod/atoms
inst/cvxmod/atoms/sqrt.py
inst/cvxmod/atoms/inv.py
inst/cvxmod/atoms/log.py
inst/cvxmod/atoms/lse.py
inst/cvxmod/atoms/quadform.py
inst/cvxmod/atoms/logdet.py
inst/cvxmod/atoms/entropy.py
inst/cvxmod/atoms/base.py
inst/cvxmod/atoms/kl.py
inst/cvxmod/atoms/norm2.py
inst/cvxmod/atoms/__init__.py
inst/cvxmod/atoms/square.py
inst/cvxmod/atoms/power.py
inst/cvxmod/atoms/exp.py
inst/cvxmod/atoms/huber.py
inst/cvxmod/codegen.py
inst/cvxmod/sets
inst/cvxmod/sets/simplesets.py
inst/cvxmod/sets/__init__.py
inst/cvxmod/symbolic.py
inst/cvxmod/__init__.py
DESCRIPTION
etc
etc/xptr.R
etc/animation.R
etc/moons-sim.R
man
man/plot.predictclusterpath.Rd
man/cvxmod.available.Rd
man/norm.rand.index.Rd
man/get.best.eigenvectors.Rd
man/halfmoon.cluster.Rd
man/cut.clusterpath.labels.Rd
man/cvxcheck.Rd
man/fillin.Rd
man/e.usual.Rd
man/clusterpath.l2.general.Rd
man/cvxmod.cluster.Rd
man/clusterpath.l1.id.Rd
man/e.exponential.auto.Rd
man/alphacolnames.Rd
man/get.old.best.Rd
man/clusterpathRcpp-package.Rd
man/gendata.Rd
man/clusterpath.l2.Rd
man/predict.clusterpath.Rd
man/e.exponential.Rd
man/plotpathmatrix.Rd
man/e.usual.k.Rd
man/clusterings.Rd
man/usual.eigenvectors.Rd
man/cluster3d.Rd
man/python.command.Rd
man/calcstats.Rd
man/castbreakpoints.Rd
man/cluster.points.Rd
man/exponential.eigenvectors.Rd
man/plot.clusterpath.Rd
man/plotpath3d.Rd
man/plot2d.Rd
man/clusterpath.l1.general.Rd
man/cut.clusterpath.Rd
man/assign.labels.Rd
man/plot.l2.Rd
src
src/l2.cpp
src/Makevars
src/l2.h
src/l1.h
src/Makevars.win
src/l1.cpp
src/interface.cpp
NEWS
clusterpathRcpp documentation built on May 21, 2017, 1:28 a.m.