dagitty: Graphical Analysis of Structural Causal Models

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A port of the web-based software 'DAGitty', available at <http://dagitty.net>, for analyzing structural causal models (also known as directed acyclic graphs or DAGs). This package computes covariate adjustment sets for estimating causal effects, enumerates instrumental variables, derives testable implications (d-separation and vanishing tetrads), generates equivalent models, and includes a simple facility for data simulation.

Author
Johannes Textor, Benito van der Zander
Date of publication
2016-08-26 09:18:31
Maintainer
Johannes Textor <johannes.textor@gmx.de>
License
GPL-2
Version
0.2-2
URLs

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Man pages

adjustmentSets
Covariate Adjustment Sets
ancestorGraph
Ancestor Graph
AncestralRelations
Ancestral Relations
as.dagitty
Convert to DAGitty object
backDoorGraph
Back-Door Graph
canonicalize
Canonicalize an Ancestral Graph
coordinates
Plot Coordinates of Variables in Graph
dagitty
Parse DAGitty Graph
dconnected
d-Separation
downloadGraph
Load Graph from dagitty.net
edges
Graph Edges
EquivalentModels
Generating Equivalent Models
exogenousVariables
Retrieve Exogenous Variables
getExample
Get Bundled Examples
graphLayout
Generate Graph Layout
graphType
Get Graph Type
impliedConditionalIndependencies
List Implied Conditional Independencies
instrumentalVariables
Find Instrumental Variables
isAdjustmentSet
Adjustment Criterion
is.dagitty
Test for Graph Class
lavaanToGraph
Convert Lavaan Model to DAGitty Graph
localTests
Test Graph against Data
moralize
Moral Graph
names.dagitty
Names of Variables in Graph
orientPDAG
Orient Edges in PDAG.
paths
Show Paths
plot.dagitty
Plot Graph
plotLocalTestResults
Plot Results of Local Tests
randomDAG
Generate DAG at Random
simulateSEM
Simulate Data from Structural Equation Model
vanishingTetrads
List Implied Vanishing Tetrads
VariableStatus
Variable Statuses

Files in this package

dagitty/DESCRIPTION
dagitty/NAMESPACE
dagitty/NEWS
dagitty/R
dagitty/R/dagitty.r
dagitty/R/internal.r
dagitty/build
dagitty/build/vignette.rds
dagitty/inst
dagitty/inst/doc
dagitty/inst/doc/dagitty4semusers.Rmd
dagitty/inst/doc/dagitty4semusers.html
dagitty/inst/js
dagitty/inst/js/RUtil.js
dagitty/inst/js/dagitty-alg.js
dagitty/inst/js/example-dags.js
dagitty/inst/js/underscore-min.js
dagitty/man
dagitty/man/AncestralRelations.Rd
dagitty/man/EquivalentModels.Rd
dagitty/man/VariableStatus.Rd
dagitty/man/adjustmentSets.Rd
dagitty/man/ancestorGraph.Rd
dagitty/man/as.dagitty.Rd
dagitty/man/backDoorGraph.Rd
dagitty/man/canonicalize.Rd
dagitty/man/coordinates.Rd
dagitty/man/dagitty.Rd
dagitty/man/dconnected.Rd
dagitty/man/downloadGraph.Rd
dagitty/man/edges.Rd
dagitty/man/exogenousVariables.Rd
dagitty/man/getExample.Rd
dagitty/man/graphLayout.Rd
dagitty/man/graphType.Rd
dagitty/man/impliedConditionalIndependencies.Rd
dagitty/man/instrumentalVariables.Rd
dagitty/man/is.dagitty.Rd
dagitty/man/isAdjustmentSet.Rd
dagitty/man/lavaanToGraph.Rd
dagitty/man/localTests.Rd
dagitty/man/moralize.Rd
dagitty/man/names.dagitty.Rd
dagitty/man/orientPDAG.Rd
dagitty/man/paths.Rd
dagitty/man/plot.dagitty.Rd
dagitty/man/plotLocalTestResults.Rd
dagitty/man/randomDAG.Rd
dagitty/man/simulateSEM.Rd
dagitty/man/vanishingTetrads.Rd
dagitty/tests
dagitty/tests/testthat
dagitty/tests/testthat.R
dagitty/tests/testthat/testAdjustments.R
dagitty/tests/testthat/testBasics.R
dagitty/tests/testthat/testChainGraphs.R
dagitty/vignettes
dagitty/vignettes/dagitty4semusers.Rmd