downscale: Downscaling Species Occupancy

A set of functions that downscales species occupancy at coarse grain sizes to predict species occupancy at fine grain sizes.

AuthorCharles Marsh [aut, cre]
Date of publication2016-11-24 15:06:52
MaintainerCharles Marsh <charliem2003@gmail.com>
LicenseGPL-2
Version1.2-4

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Files

DESCRIPTION
NAMESPACE
NEWS
R
R/DataInput.R R/HuiFunctions.R R/OptimiseParameters.R R/OptimiseParametersFNB.R R/OptimiseParametersGNB.R R/OptimiseParametersLogis.R R/OptimiseParametersThomas.R R/PredictFunctions.R R/ResidFunctions.R R/StartingParams.R R/ThomasFunctions.R R/downscale.R R/ensemble.downscale.R R/hui.downscale.R R/plot.predict.downscale.R R/predict.downscale.R R/upgrain.R R/upgrain.threshold.R
build
build/vignette.rds
inst
inst/doc
inst/doc/Downscaling.R
inst/doc/Downscaling.Rnw
inst/doc/Downscaling.pdf
inst/doc/Upgraining.R
inst/doc/Upgraining.Rnw
inst/doc/Upgraining.pdf
inst/extdata
inst/extdata/UK.cpg
inst/extdata/UK.dbf
inst/extdata/UK.prj
inst/extdata/UK.sbn
inst/extdata/UK.sbx
inst/extdata/UK.shp
inst/extdata/UK.shx
inst/extdata/atlas_data.txt
man
man/Downscale-package.Rd man/downscale.Rd man/ensemble.downscale.Rd
man/figures
man/figures/Equations.png
man/figures/Flow.png
man/figures/Maps.png
man/figures/Original.png
man/figures/Params.png
man/figures/Threshold.png
man/figures/Thumbs.db
man/hui.downscale.Rd man/plot.predict.downscale.Rd man/predict.downscale.Rd man/upgrain.Rd man/upgrain.threshold.Rd
vignettes
vignettes/Downscaling-downscale.pdf
vignettes/Downscaling-downscale.png
vignettes/Downscaling-downscale11.pdf
vignettes/Downscaling-downscale11.png
vignettes/Downscaling-downscale13.pdf
vignettes/Downscaling-downscale14.pdf
vignettes/Downscaling-downscale14.png
vignettes/Downscaling-downscale16.pdf
vignettes/Downscaling-downscale16.png
vignettes/Downscaling-downscale18.pdf
vignettes/Downscaling-downscale18.png
vignettes/Downscaling-downscale19.pdf
vignettes/Downscaling-downscale19.png
vignettes/Downscaling-downscale22.pdf
vignettes/Downscaling-downscale22.png
vignettes/Downscaling-downscale23.pdf
vignettes/Downscaling-downscale23.png
vignettes/Downscaling-downscale24.pdf
vignettes/Downscaling-downscale24.png
vignettes/Downscaling-downscale26.pdf
vignettes/Downscaling-downscale26.png
vignettes/Downscaling-downscale30.png
vignettes/Downscaling-downscale32.png
vignettes/Downscaling-downscale33.png
vignettes/Downscaling-downscale34.png
vignettes/Downscaling-downscale36.png
vignettes/Downscaling-downscale38.png
vignettes/Downscaling-downscale40.png
vignettes/Downscaling-downscale41.png
vignettes/Downscaling-downscale42.png
vignettes/Downscaling-downscale6.pdf
vignettes/Downscaling-downscale6.png
vignettes/Downscaling-upgrain.downscale.pdf
vignettes/Downscaling-upgrain.downscale.png
vignettes/Downscaling.Rnw
vignettes/Thumbs.db
vignettes/Upgraining-upgrain.downscale.pdf
vignettes/Upgraining-upgrain.downscale.png
vignettes/Upgraining.Rnw
vignettes/figures
vignettes/figures/All_interior.png
vignettes/figures/Flow.png
vignettes/figures/Interior_only.png
vignettes/figures/Original_upgrain.png
vignettes/figures/Saturation.png
vignettes/figures/Threshold_maps.png
vignettes/figures/Threshold_maps_2_scales.png
vignettes/figures/Threshold_maps_4_scales.png
vignettes/figures/Threshold_plots.png
vignettes/figures/Thumbs.db

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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All documentation is copyright its authors; we didn't write any of that.