ecolMod: "A Practical Guide to Ecological Modelling - Using R as a Simulation Platform"

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Figures, data sets and examples from the book "A practical guide to ecological modelling - using R as a simulation platform" by Karline Soetaert and Peter MJ Herman (2009). Springer. All figures from chapter x can be generated by "demo(chapx)", where x = 1 to 11. The R-scripts of the model examples discussed in the book are in subdirectory "examples", ordered per chapter. Solutions to model projects are in the same subdirectories.

Author
Karline Soetaert <karline.soetaert@nioz.nl>, Peter MJ Herman <peter.herman@nioz.nl>
Date of publication
2015-10-05 13:56:39
Maintainer
Karline Soetaert <karline.soetaert@nioz.nl>
License
GPL (>= 2)
Version
1.2.6.1

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Man pages

deepCmin
results of the calibration exercise from chapter 4.4.4
dilution
Draws dilution culture setup
ecolMod
A practical guide to ecological modelling - using R as a...
OMEXDIAsteady
steady-state application of the OMEXDIA diagenetic model -...
pricefit
Pseudo-random search algorithm of Price (1997)
SCOC
a Sediment Community Oxygen Consumption (SCOC) dataset
Zoogrowth
a zooplankton growth dataset

Files in this package

ecolMod/DESCRIPTION
ecolMod/NAMESPACE
ecolMod/R
ecolMod/R/Bookdemo.r
ecolMod/R/OMEXDIAsteady.r
ecolMod/build
ecolMod/build/vignette.rds
ecolMod/data
ecolMod/data/SCOC.rda
ecolMod/data/Zoogrowth.rda
ecolMod/data/deepCmin.rda
ecolMod/demo
ecolMod/demo/00Index
ecolMod/demo/chap1.r
ecolMod/demo/chap10.r
ecolMod/demo/chap11.r
ecolMod/demo/chap2.r
ecolMod/demo/chap3.r
ecolMod/demo/chap4.r
ecolMod/demo/chap5.r
ecolMod/demo/chap6.r
ecolMod/demo/chap7.r
ecolMod/demo/chap8.r
ecolMod/demo/chap9.r
ecolMod/inst
ecolMod/inst/doc
ecolMod/inst/doc/ecolMod.R
ecolMod/inst/doc/ecolMod.Rnw
ecolMod/inst/doc/ecolMod.pdf
ecolMod/man
ecolMod/man/OMEXDIAsteady.Rd
ecolMod/man/SCOC.Rd
ecolMod/man/Zoogrowth.Rd
ecolMod/man/deepCmin.Rd
ecolMod/man/dilution.Rd
ecolMod/man/ecolMod.Rd
ecolMod/man/pricefit.Rd
ecolMod/src
ecolMod/src/competition.f
ecolMod/src/omexdia.f
ecolMod/src/rndnum.c
ecolMod/vignettes
ecolMod/vignettes/StabilityFig.pdf
ecolMod/vignettes/ecolMod.Rnw
ecolMod/vignettes/vignettes.bib