euroMix: Calculations for DNA mixtures
Version 1.1

Calculations for DNA mixtures accounting for possibly inbred pedigrees (simulations with conditioning, LR). Exact p-values.

Browse man pages Browse package API and functions Browse package files

AuthorGuro Dorum and Thore Egeland
Date of publication2015-12-07 08:36:04
Maintainer<Thore.Egeland@nmbu.no>
LicenseGPL
Version1.1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("euroMix", repos="http://R-Forge.R-project.org")

Man pages

convertToFamilias: Convert genotype data to Familias format
db: Allele database
db2: Allele database.
euroMix-package: Forensic calculations including mixtures with pedigrees
famMix: Likelihood for mixtures with related contributors based on...
generate: Generates genotypes for unknown contributors
LRmoments: Calculates expectation, standard deviation and skewness of LR...
LRp: Compute the p-value corresponding to a likelihood ratio.
LRpvalue: Compute the p-value corresponding to a likelihood ratio.
LRstat: Distribution of LR(HP) and LR(HD)
paraMix: Likelihood for mixtures with related contributors based on...
pvalue.machine: Computes the p-value for LR.suspect
q012: Probabilities for pairwise relationships
qkappa: Calculates joint distribution for a pair of individals given...
simLR: Likelihood for mixtures that may have related contributors...
simMixMerlin: A DNA mixture is generated from individual genotypes using...
simMixParamlink: Generates DNA mixtures
tableELRHP: Calculates 'E(LR(HP))'

Functions

Example2 Source code
LRmoments Man page Source code
LRp Man page Source code
LRpvalue Man page Source code
LRstat Man page Source code
checkInput Man page Source code Source code
convert Source code
convertToFamilias Man page Source code
db Man page
db2 Man page
euroMix Man page
euroMix-package Man page
famMix Man page Source code
g1Mix Source code
generate Man page Source code
gxMix Source code
paraMix Man page Source code
preFamilias2 Source code
prepare.input Source code
pvalue.machine Man page Source code
q012 Man page Source code
qkappa Man page Source code
readMixtureData Source code
restAllel Source code
simLR Man page Source code
simMixMerlin Man page Source code
simMixParamlink Man page Source code
tableELRHP Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/LRmoments.R
R/LRp.R
R/LRpvalue.R
R/LRstat.R
R/convertToFamilias.R
R/famMix.R
R/generate.R
R/globals.R
R/paraMix.R
R/pvalue.machine.R
R/q012.R
R/qkappa.R
R/simLR.R
R/simMixMerlin.R
R/simMixParamlink.R
R/tableELRHP.R
data
data/db.rda
data/db2.rda
data/ex9m.rda
data/testdata.rda
man
man/LRmoments.Rd
man/LRp.Rd
man/LRpvalue.Rd
man/LRstat.Rd
man/convertToFamilias.Rd
man/db.Rd
man/db2.Rd
man/euroMix-package.Rd
man/famMix.Rd
man/generate.Rd
man/paraMix.Rd
man/pvalue.machine.Rd
man/q012.Rd
man/qkappa.Rd
man/simLR.Rd
man/simMixMerlin.Rd
man/simMixParamlink.Rd
man/tableELRHP.Rd
src
src/prodrecfunction.c
euroMix documentation built on May 21, 2017, 3:54 a.m.