Man pages for fuzzySim
Fuzzy Similarity in Species Distributions
| appendData | Append data |
| biasLayer | Compute a bias layer |
| bioThreat | Biotic threat of a stronger over a weaker species based on... |
| cleanCoords | Clean coordinates |
| corSelect | Select among correlated variables based on a given criterion |
| distMat | Distance matrix for spatial coordinates |
| distPres | (Inverse) distance to the nearest presence |
| dms2dec | Degree-minute-second to decimal degree coordinates |
| entropy | (Fuzzy) entropy |
| Fav | Favourability (probability without the effect of sample... |
| favClass | Classify favourability into 3 categories (low, intermediate,... |
| FDR | False Discovery Rate |
| fuzSim | Fuzzy similarity |
| fuzzyConsensus | Fuzzy consensus among model predictions |
| fuzzyOverlay | Overlay operations based on fuzzy logic |
| fuzzyRangeChange | Range change based on continuous (fuzzy) values |
| fuzzySim-package | Fuzzy Similarity in Species Distributions |
| getPreds | Get model predictions |
| getRegion | Get region |
| gridRecords | Grid (or thin) point occurrence records to the resolution of... |
| integerCols | Classify integer columns |
| modelTrim | Trim off non-significant variables from a model |
| modOverlap | Overall overlap between model predictions |
| multConvert | Multiple conversion |
| multGLM | GLMs with variable selection for multiple species |
| multicol | Analyse multicollinearity in a dataset, including VIF |
| multTSA | Trend Surface Analysis for multiple species |
| pairwiseRangemaps | Pairwise intersection (and union) of range maps |
| partialResp | Partial response plot(s) for probability or favourability |
| percentTestData | Percent test data |
| prevalence | Prevalence |
| rangemapSim | Pairwise similarity between rangemaps |
| rarity | (Fuzzy) rarity |
| rotif.env | Rotifers and environmental variables on TDWG level 4 regions... |
| rotifers | Rotifer species on TDWG level 4 regions of the world |
| selectAbsences | Select (spatially biased) absence rows. |
| sharedFav | Shared favourability for two competing species |
| simFromSetOps | Calculate similarity from set operations |
| simMat | Pair-wise (fuzzy) similarity matrix |
| spCodes | Obtain unique abbreviations of species names |
| splist2presabs | Convert a species list to a presence-absence table |
| stepByStep | Compare model predictions along a stepwise variable selection... |
| stepwise | Stepwise regression |
| summaryWald | Model summary with Wald (instead of z) test statistics |
| timer | Timer |
| transpose | Transpose (part of) a matrix or dataframe |
| triMatInd | Triangular matrix indices |
| vulnerability | (Fuzzy) vulnerability |
