gRc: Inference in Graphical Gaussian Models with Edge and Vertex Symmetries
Version 0.4-1

Estimation, model selection and other aspects of statistical inference in Graphical Gaussian models with edge and vertex symmetries (Graphical Gaussian models with colours)

Browse man pages Browse package API and functions Browse package files

AuthorSren Hjsgaard <sorenh@math.aau.dk>, Steffen L. Lauritzen <steffen@stats.ox.ac.uk>
Date of publication2012-11-24 22:18:54
MaintainerSren Hjsgaard <sorenh@math.aau.dk>
LicenseGPL
Version0.4-1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("gRc", repos="http://R-Forge.R-project.org")

Man pages

add1drop1: Add or drop colour classes to RCOX models
comparecc: Compare colour classes of an RCOX model
fit: Fit RCOX models
fitInternal: Functions used in connection with fitting of RCOX models
getSlot: Accessing RCOX model objects
gRcox: The package 'gRc': summary information
internal: Internal functions for the gRc package
join1split1: Joining and splitting of colour classes in RCOX models
rcox: Main function for specifying RCON/RCOR models
stepwise: Stepwise model selection in RCOX models
tr: Calculate trace of various matrix products
update: Update an RCOX model

Functions

First.lib Source code
K2theta Man page Source code
K2theta.rcon Man page Source code
K2theta.rcor Man page Source code
add1.rcox Man page Source code
addStat Source code
addVL2 Man page Source code
addccnames Source code
as.L Man page Source code
as.L2 Man page Source code
as.V Man page Source code
as.atom Man page Source code
as.cc Man page Source code
as.cc.default Man page Source code
as.cc.list Man page Source code
as.cclist Man page Source code
bootstrapVCOV Source code
buildDataRepresentation Source code
buildInternalRepresentation Source code
buildStandardRepresentation Source code
calculateVCOV Man page Source code Source code
cardOrder Man page Source code
cc2formula Man page Source code
cc2str Man page Source code
ccl2names Source code
cholSolve Man page Source code
coef.rcox Man page Source code
compareModelRCOX Source code
comparecc Man page Source code
dataRep Man page Source code
dimension Man page Source code
drop1.rcox Man page Source code
ecc2edges Man page Source code
ellK Man page
evalInECC Man page Source code
evalOutECC Man page Source code
extractIndexMatrix Man page
extractStat Source code
findKinModel Man page Source code
findKinModel.rcox Man page Source code
findWald Source code
fit Man page
fit.rcox Man page Source code
fitIPSedge Man page Source code Source code
fitIPSset Man page Source code
fitInfo Man page Source code
fitNR Man page Source code
fitNR2 Man page Source code
formula2names Man page Source code
formula2names.NULL Man page Source code
formula2names.default Man page Source code
formula2names.formula Man page Source code
formula2names.list Man page Source code
formula2string Man page Source code
formula2string.default Man page Source code
formula2string.list Man page Source code
gRc Man page
getIndex Man page Source code
getIndex.character Man page Source code
getIndex.default Man page Source code
getIndex.list Man page Source code
getScore Man page Source code
getScore.rcon Man page Source code
getScore.rcor Man page Source code
getSlot Man page Man page Source code Source code
getcc Man page Source code
getecc Man page Source code
getedges Man page Source code
getvcc Man page Source code
imatch Man page
indices2vectors Man page Source code
intRep Man page Source code
ipm Man page Source code
ipm.rcon Man page Source code
ipm.rcor Man page Source code
is.L Man page Source code
is.L2 Man page Source code
is.V Man page Source code
is.elementVL Man page Source code
is.subsetLL Man page Source code
join1 Man page Source code
joincc Source code
listOrder Man page Source code
listOrder.atom Man page
listOrder.cc Man page
listOrder.default Man page Source code
listOrder.list Man page Source code
listOrder.numeric Man page Source code
logL Man page Source code
match.containsLL2 Man page Source code
matchLL2 Man page Source code
matchVL Man page Source code
matchVL2 Man page Source code
matching Man page Source code
matching.rcon Man page Source code
matching.rcor Man page Source code
maximalSet Man page
maximalSetL2 Man page Source code
modNewt Man page Source code
names2formula Man page Source code
names2formula.default Man page Source code
names2formula.list Man page Source code
names2indices Man page Source code
names2pairs Man page
nestedList2df Source code
plot.rcox Man page Source code
print.atom Man page Source code
print.cc Man page Source code
print.cclist Man page Source code
print.colourClass Man page Source code
print.coloutClass Man page
print.rcox Man page Source code
print.statTable Man page Source code
print.summary.rcox Man page Source code
printTestResult Source code
rconIPM Man page Source code Source code
rconScoreMatch Man page Source code
rconScoreTheta Man page Source code Source code
rcorIPM Man page Source code
rcorScoreMatch Man page Source code
rcorScoreTheta Man page Source code
rcox Man page Source code
redundant.index Source code
refitA Man page Source code
regularizeK Man page Source code
scoring Man page Source code
scoring.rcox Man page
setdiffLL Man page Source code
setequalLL Man page Source code Source code
split1 Man page Source code
splitcc Source code
stepDetailsString Source code
stepadd1 Man page Source code
stepdrop1 Man page Source code
stepjoin1 Man page Source code Source code
stepsplit1 Man page Source code
subsetof Man page
subsetofList Man page
summary.rcox Man page Source code
theta2K Man page Source code
theta2K.rcon Man page Source code
theta2K.rcor Man page Source code
toLisp Man page Source code
toLisp.cc Man page Source code
toLisp.default Man page Source code
toLisp.list Man page Source code
tocc Man page Source code
trA Man page Source code
trA2 Man page
trA2.list Man page
trA2.matrix Man page
trAW Man page Source code
trAW2 Man page
trAW2.list Man page
trAW2.matrix Man page
trAWB Man page Source code
trAWB.list Man page
trAWB.matrix Man page
trAWB2 Man page
trAWBV Man page Source code
trAWBV2 Man page
trAWBV2.list Man page
trAWBV2.matrix Man page
trAWBW Man page Source code
trAWBW.list Man page
trAWBW.matrix Man page
trAWBW2 Man page
unionL2L2 Man page Man page Source code
unionLL Man page Man page Source code
update.rcox Man page Source code
vcov.rcox Man page Source code

Files

Wishlist.txt
R
R/utility4.R
R/comparecc.R
R/rcox4.R
R/split1join1.R
R/update4.R
R/getScoreAndInformation4.R
R/cleverTraceMat.R
R/display4.R
R/switchThetaK4.R
R/stepwise4.R
R/summary-vcov.R
R/sets-SetOp-Lists.R
R/zzz-generatingClasscImplementation.R
R/RCON-IPM5.R
R/calculateVCOV.R
R/xxx2yyy.R
R/zzz.R
R/rcon-IPM4.R
R/repairK.R
R/rcox-Scoring.R
R/fitMain.R
R/add1drop1.R
R/rcox-ScoreMatching4.R
R/testingMisc.R
R/rcor-IPM4.R
NAMESPACE
TODO.txt
inst
inst/CITATION
DESCRIPTION
ChangeLog
man
man/add1drop1.Rd
man/gRcox.Rd
man/stepwise.Rd
man/internal.Rd
man/fitInternal.Rd
man/tr.Rd
man/fit.Rd
man/join1split1.Rd
man/update.Rd
man/rcox.Rd
man/comparecc.Rd
man/getSlot.Rd
src
src/rconipm2.c
src/scorematching.c
src/clevertrace.c
src/shd_print.h
src/Makevars
src/shd_print.c
src/shd_utils.h
src/shd_utils.c
src/scorematching.h
src/clevertrace.h
gRc-Ex.R
demo
demo/00Index
demo/gRc-JSS.R
gRc documentation built on May 21, 2017, 1:18 a.m.