gravy: Gradient Analysis of Vegetation
Version 0.2-1

Gravy is an experimental package of tools for gradient analysis of community data. The functions will be incorporated in `vegan' when they are close of being satisfactory. At the moment, using `gravy' may require an adventurous mind and good knowledge of methods and R.

AuthorJari Oksanen
Date of publication2013-04-09 12:13:31
MaintainerJari Oksanen <jari.oksanen@oulu.fi>
LicenseGPL-2
Version0.2-1
URL http://vegan.r-forge.r-project.org/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("gravy", repos="http://R-Forge.R-project.org")

Popular man pages

boxgradient: Display Species Response along Gradients as Boxplots or...
GaussPara: Finds Gaussian Parameters of a Response Model.
gravy-internal: Internal gravy functions
HOF: Fits Huisman-Olff-Fresco (HOF) Response Models for Species...
mtf01: Species Data and Altitude from Mt. Field, Tasmania.
nichelap: Overlap of Two Species Responses along a Gradient.
plotGrad: Plots Species gainst an Environmental Gradient
See all...

All man pages Function index File listing

Man pages

betadiversity: Estimates Beta Diversity as the instantaneous rate of change...
boxgradient: Display Species Response along Gradients as Boxplots or...
GaussPara: Finds Gaussian Parameters of a Response Model.
gradscale: Rescales an ecological gradient to a constant rate of change...
gravy-internal: Internal gravy functions
hillscale: Hill indices of Beta diversity and gradient scaling to...
HOF: Fits Huisman-Olff-Fresco (HOF) Response Models for Species...
mtf01: Species Data and Altitude from Mt. Field, Tasmania.
nichelap: Overlap of Two Species Responses along a Gradient.
plotGrad: Plots Species gainst an Environmental Gradient

Functions

GaussPara Man page
GaussPara.HOF Man page
GaussPara.HOF.frame Man page
GaussPara.optop.HOF Man page
GaussPara.tol.HOF Man page
HOF Man page
HOF.data.frame Man page
HOF.default Man page
HOF1 Man page
as.matrix.nichelap.HOF.frame Man page
betadiversity Man page
betadiversity.HOF.frame Man page
betahill Man page
boxgradient Man page
coef.HOF Man page
deviance.HOF Man page
df.residual.HOF Man page
fitted.HOF Man page
gaussgradient Man page
gradder.HOF Man page
gradscale Man page
hillscale Man page
logLik.HOF Man page
mtf.alt Man page
mtf01 Man page
nichelap Man page
nichelap.HOF Man page
nichelap.HOF.frame Man page
onAttach Source code
pick.model Man page
plot.HOF Man page
plot.HOF.frame Man page
plot.betadiversity Man page
plot.hillscale Man page
plotGrad Man page
predict.HOF Man page
residuals.HOF Man page
scale01 Man page
ssHOF Man page

Files

DESCRIPTION
NAMESPACE
R
R/GaussPara.HOF.R
R/GaussPara.HOF.frame.R
R/GaussPara.R
R/GaussPara.optop.HOF.R
R/GaussPara.tol.HOF.R
R/HOF.R
R/HOF.data.frame.R
R/HOF.default.R
R/HOF1.R
R/as.matrix.nichelap.HOF.frame.R
R/betadiversity.HOF.frame.R
R/betadiversity.R
R/betahill.R
R/boxgradient.R
R/coef.HOF.R
R/deviance.HOF.R
R/df.residual.HOF.R
R/fitted.HOF.R
R/gaussgradient.R
R/gradder.HOF.R
R/gradscale.R
R/hillscale.R
R/logLik.HOF.R
R/nichelap.HOF.R
R/nichelap.HOF.frame.R
R/nichelap.R
R/pick.model.R
R/plot.HOF.R
R/plot.HOF.frame.R
R/plot.betadiversity.R
R/plot.hillscale.R
R/plotGrad.R
R/predict.HOF.R
R/print.GaussPara.HOF.R
R/print.GaussPara.HOF.frame.R
R/print.HOF.R
R/print.HOF.frame.R
R/print.betadiversity.R
R/print.hillscale.R
R/print.nichelap.HOF.frame.R
R/residuals.HOF.R
R/scale01.R
R/ssHOF.R
R/zzz.R
data
data/mtf.alt.rda
data/mtf01.rda
inst
inst/ChangeLog
man
man/GaussPara.Rd
man/HOF.Rd
man/betadiversity.Rd
man/boxgradient.Rd
man/gradscale.Rd
man/gravy-internal.Rd
man/hillscale.Rd
man/mtf01.Rd
man/nichelap.Rd
man/plotGrad.Rd
src
src/hill.c
src/hofutil.c
gravy documentation built on May 21, 2017, 12:30 a.m.

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