hisemi: Hierarchical Semiparametric Regression of Test Statistics

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This package implements methods for hierarchical semiparametric regression models for test statistics. Specifically, test statistics given the null/alternative hypotheses are modeled parametrically, whereas the unobservable status of null/alternative hypotheses are modeled using nonparametric additive logistic regression over covariates.

Author
Long Qu
Date of publication
2013-08-30 21:08:35
Maintainer
Long Qu <long.qu@wright.edu>
License
GPL (>= 2)
Version
1.0-319

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Man pages

coef.hisemit
Extracts fitted parameters from a hisemit object
confint.hisemit
Extract Wald-type asymptotic confidence intervals from a...
directSum
Direct sum of matrices
EMupdate
Utility function performing EM algorithm updates
fitted.hisemit
Extract fitted values from a hisemit object
hisemi-internal
internal functions not to be used by users directly
hisemi-package
The package includes functions for fitting hierarchical...
logistic.enp
Fit a logistic curve to the raw effective number of...
logit
Logit link and its inverse
logLik.hisemit
Extract the log likelihood from a hisemit object
n.knots
Number of spline knots
NRupdate
Utility function performing Newton-Raphson algorithm updates
OsplinePen
O-spline penalty matrix
penLik.EMNewton
Fits hierarchical semiparametric regression model to...
plot.hisemit
Plot a hisemit object
print.hisemit
Print a summary of a hisemit object
resid.hisemit
Extract residuals from a hisemit object
scaledTMix.null
Fit the null model to t-statistics
scaledTMix.psat
Fits a partially saturated model to t-statistics
scaledTMix.sat
Fits saturated model to t-statistics
tPoly.newton
Fits hierarchical global polynomial regression model to...
vcov.hisemit
Extract the asymptotic variance-covariance matrix of a...

Files in this package

hisemi/DESCRIPTION
hisemi/NAMESPACE
hisemi/R
hisemi/R/EM.Newton.R
hisemi/R/EM.Newton.support.R
hisemi/R/EMupdate.R
hisemi/R/NRupdate.R
hisemi/R/OsplinePen.R
hisemi/R/directSum.R
hisemi/R/logistic.enp.R
hisemi/R/n.knots.R
hisemi/R/scaledTMix.R
hisemi/R/tPoly.newton.R
hisemi/man
hisemi/man/EMupdate.Rd
hisemi/man/NRupdate.Rd
hisemi/man/OsplinePen.Rd
hisemi/man/coef.hisemit.Rd
hisemi/man/confint.hisemit.Rd
hisemi/man/directSum.Rd
hisemi/man/fitted.hisemit.Rd
hisemi/man/hisemi-internal.Rd
hisemi/man/hisemi-package.Rd
hisemi/man/logLik.hisemit.Rd
hisemi/man/logistic.enp.Rd
hisemi/man/logit.Rd
hisemi/man/n.knots.Rd
hisemi/man/penLik.EMNewton.Rd
hisemi/man/plot.hisemit.Rd
hisemi/man/print.hisemit.Rd
hisemi/man/resid.hisemit.Rd
hisemi/man/scaledTMix.null.Rd
hisemi/man/scaledTMix.psat.Rd
hisemi/man/scaledTMix.sat.Rd
hisemi/man/tPoly.newton.Rd
hisemi/man/vcov.hisemit.Rd