Man pages for mGSZ
Gene set analysis based on GSZ-scoring function and asymptotic p-value
| calc.z.var_int | Internal mGSZ function |
| count.hyge.var.mean_int | Internal mGSZ function |
| count.prob.sum_int | Internal mGSZ function |
| diff.c.perm_int | Internal mGSZ function |
| diff.FC.perm_int | Internal mGSZ function |
| emp_int | Internal mGSZ function |
| emp.wrs_int | Internal WRS function |
| FC_int | Internal mGSZ function |
| flip_list_struct_int | Internal mGSZ function |
| geneSetsList | Convert gene set data in gmt file to R list |
| KS.p.values_int | Internal KS function |
| KS.score_int | Internal KS function |
| listTOclMatrix_int | Internal mGSZ function |
| log.ev.cdf_int | Internal mGSZ function |
| log.norm.cdf_int | Internal mGSZ function |
| mAllez.p.values_int | Internal mGSZ function |
| mGSA.p.values_int | Internal mGSZ function |
| mGSZ | Gene set analysis based on Gene Set Z-scoring function and... |
| mGSZ.adj.mean.std_int | Internal mGSZ function |
| mGSZ.p.values_int | Internal mGSZ function |
| mGSZ.test.score2_int | Internal mGSZ function |
| mGSZ.test.score4_int | Internal mGSZ function |
| mGSZ.test.score_int | Internal mGSZ function |
| mGSZ.test.score.stb2_int | Internal mGSZ function |
| mGSZ.test.score.stb3_int | Internal mGSZ function |
| mGSZ.test.score.stb4_int | Internal mGSZ function |
| pick.data.cols_int | Internal mGSZ function |
| plotProfile | Plot GSZ scoring function profile |
| rm.rows.with.noSetMembers_int | Internal mGSZ function |
| rm.small.genesets_int | Internal mGSZ function |
| setSummary_int | Internal mGSZ function |
| SS.p.values_int | Internal mGSZ function |
| SS.test.score_int | Internal mGSZ function |
| StabPlotData | GSZ scoring function profile data |
| sum.test.score_int | Internal mGSZ function |
| sumVarMean.calc_int | Internal mGSZ function |
| toMatrix_int | Internal mGSZ function |
| toTable | Table with top gene sets |
| WRS.p.values_int | Internal WRS function |
| WRS.test.score_int | Internal WRS function |
