mefa: Multivariate Data Handling in Ecology and Biogeography

A framework package aimed to provide standardized computational environment for specialist work via object classes to represent the data coded by samples, taxa and segments (i.e. subpopulations, repeated measures). It supports easy processing of the data along with cross tabulation and relational data tables for samples and taxa. An object of class `mefa' is a project specific compendium of the data and can be easily used in further analyses. Methods are provided for extraction, aggregation, conversion, plotting, summary and reporting of `mefa' objects. Reports can be generated in plain text or LaTeX format. Vignette contains worked examples.

AuthorPeter Solymos
Date of publication2013-12-03 17:52:40
MaintainerPeter Solymos <solymos@ualberta.ca>
LicenseGPL-2
Version3.2-5
http://mefa.r-forge.r-project.org/

View on R-Forge

Functions

aggregate.mefa Man page
aoplot Man page
aoplot.default Man page
as.array.mefa Man page
as.data.frame.mefa Man page
as.data.frame.stcs Man page
as.list.mefa Man page
as.matrix.mefa Man page
as.mefa Man page
as.Mefa Man page
as.mefa.array Man page
as.mefa.default Man page
as.mefa.list Man page
as.stcs Man page
as.stcs.default Man page
as.Xtab Man page
boxplot.mefa Man page
boxplot.stcs Man page
cdrop Man page
dim.mefa Man page
dimnames.mefa Man page
dol.count Man page
dol.samp Man page
dol.taxa Man page
fill.na Man page
image.dist Man page
image.mefa Man page
image.stcs Man page
is.dist Man page
is.mefa Man page
is.stcs Man page
label Man page
label<- Man page
mat2list Man page
mefa Man page
[.mefa Man page
mefaCheck Man page
mefaCompare Man page
mefaCrosstab Man page
mefadocs Man page
mefalogo Man page
mefaNestedless Man page
mefa-package Man page
mefaTables Man page
mefaweb Man page
melt Man page
melt.mefa Man page
mfill Man page
msr Man page
mss Man page
mtr Man page
mts Man page
plot.mefa Man page
plot.stcs Man page
print.mefa Man page
print.summary.mefa Man page
qvector Man page
rdrop Man page
rep.data.frame Man page
report Man page
report.mefa Man page
samp Man page
segm Man page
stack.dist Man page
stcs Man page
summary.mefa Man page
summary.stcs Man page
taxa Man page
vec2dist Man page
xtab Man page

Files

mefa/DESCRIPTION
mefa/NAMESPACE
mefa/R
mefa/R/aggregate.mefa.R mefa/R/aoplot.R mefa/R/aoplot.default.R mefa/R/as.array.mefa.R mefa/R/as.data.frame.mefa.R mefa/R/as.data.frame.stcs.R mefa/R/as.list.mefa.R mefa/R/as.matrix.mefa.R mefa/R/as.mefa.R mefa/R/as.mefa.array.R mefa/R/as.mefa.default.R mefa/R/as.mefa.list.R mefa/R/as.stcs.R mefa/R/as.stcs.default.R mefa/R/boxplot.mefa.R mefa/R/boxplot.stcs.R mefa/R/cdrop.R mefa/R/coercionMethodsForMefa4.R mefa/R/dim.mefa.R mefa/R/dimnames.mefa.R mefa/R/extract.mefa.R mefa/R/fill.na.R mefa/R/image.dist.R mefa/R/image.mefa.R mefa/R/image.stcs.R mefa/R/is.dist.R mefa/R/is.mefa.R mefa/R/is.stcs.R mefa/R/label.R mefa/R/mat2list.R mefa/R/mefa.R mefa/R/mefaCheck.R mefa/R/mefaCompare.R mefa/R/mefaCrosstab.R mefa/R/mefaNestedless.R mefa/R/mefaTables.R mefa/R/mefadocs.R mefa/R/mefalogo.R mefa/R/mefaweb.R mefa/R/melt.R mefa/R/melt.mefa.R mefa/R/mfill.R mefa/R/msr.R mefa/R/mss.R mefa/R/mtr.R mefa/R/mts.R mefa/R/plot.mefa.R mefa/R/plot.stcs.R mefa/R/print.mefa.R mefa/R/print.summary.mefa.R mefa/R/qvector.R mefa/R/rdrop.R mefa/R/rep.data.frame.R mefa/R/report.R mefa/R/report.mefa.R mefa/R/samp.R mefa/R/samp.default.R mefa/R/segm.R mefa/R/segm.default.R mefa/R/stack.dist.R mefa/R/stcs.R mefa/R/summary.mefa.R mefa/R/summary.stcs.R mefa/R/taxa.R mefa/R/taxa.default.R mefa/R/vec2dist.R mefa/R/xtab.R mefa/R/xtab.default.R mefa/R/zzz.R
mefa/build
mefa/build/vignette.rds
mefa/data
mefa/data/dol.count.rda
mefa/data/dol.samp.rda
mefa/data/dol.taxa.rda
mefa/demo
mefa/demo/00Index
mefa/demo/mefa.R
mefa/inst
mefa/inst/CITATION
mefa/inst/ChangeLog
mefa/inst/SampleReport
mefa/inst/doc
mefa/inst/doc/mefa.R
mefa/inst/doc/mefa.Rnw
mefa/inst/doc/mefa.pdf
mefa/man
mefa/man/aggregate.mefa.Rd mefa/man/aoplot.Rd mefa/man/as.mefa.Rd mefa/man/dolina.Rd mefa/man/fill.na.Rd mefa/man/image.dist.Rd mefa/man/label.Rd mefa/man/mat2list.Rd mefa/man/mefa.Rd mefa/man/mefaCheck.Rd mefa/man/mefaCrosstab.Rd mefa/man/mefaNestedless.Rd mefa/man/mefaTables.Rd mefa/man/mefadocs.Rd mefa/man/mefalogo.Rd mefa/man/mefaweb.Rd mefa/man/melt.mefa.Rd mefa/man/plot.mefa.Rd mefa/man/qvector.Rd mefa/man/rep.data.frame.Rd mefa/man/report.mefa.Rd mefa/man/stack.dist.Rd mefa/man/stcs.Rd
mefa/tests
mefa/tests/tests.R
mefa/vignettes
mefa/vignettes/mefa.Rnw
mefa/vignettes/mefa.bib

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