mif2-methods: Methods of the "mif2d.class" class

In mif2: MIF2 algorithm development package

Description

Methods of the mif2d.class class.

Usage

## S4 method for signature 'mif2d.pomp'
logLik(object, ...)
## S4 method for signature 'mif2d.pomp'
conv.rec(object, pars, transform = FALSE, ...)
## S4 method for signature 'mif2d.pomp'
plot(x, y = NULL, ...)

Arguments

object, x	The mif2d.pomp object.
pars	Names of parameters.
y	Ignored.
transform	optional logical; should the parameter transformations be applied? See coef for details.
...	Further arguments (either ignored or passed to underlying functions).

Methods

conv.rec

conv.rec(object, pars = NULL) returns the columns of the convergence-record matrix corresponding to the names in pars. By default, all rows are returned.

logLik

Returns the value in the loglik slot.

plot

Plots a series of diagnostic plots.

Author(s)

Aaron A. King kingaa at umich dot edu

References

E. L. Ionides, C. Bret\'o, & A. A. King, Inference for nonlinear dynamical systems, Proc. Natl. Acad. Sci. U.S.A., 103:18438–18443, 2006.

A. A. King, E. L. Ionides, M. Pascual, and M. J. Bouma, Inapparent infections and cholera dynamics, Nature, 454:877–880, 2008.

See Also

mif, pomp, pomp-class, pfilter

mif2 documentation built on May 2, 2019, 6:48 p.m.