neotoma: A Package to access the Neotoma Paleoecological Database using an API.

The package accesses the Neotoma Paleoecological Database using the published API (http://api.neotomadb.org/). The functions in this package access various pre-built API functions and attempt to return the results from Neotoma in a usable format for researchers and the public.

Author
Simon J. Goring
Date of publication
2013-10-29 16:00:00
Maintainer
Simon Goring <goring@wisc.edu>
License
CC BY-SA 3.0
Version
1.0
URLs

View on R-Forge

Man pages

compile_list
Function to convert assemblage taxa to standardized lists.
get_contacts
A function to obtain contact information for data...
get_datasets
Obtain full datasets from the Neotoma Paleoecological...
get_download
Function to return full dataset records.
get_publication
A file to get publications for sites or datasets in the...
get_sites
Return Site Information.
get_table
Get Neotoma value tables.
get_taxa
Get taxon information from Neotoma.
pollen.equiv
A table to convert the pollen taxa identified by...
taxon.list
Neotoma taxon list
translate.table
A table to convert the original taxa to standardized lists.

Files in this package

neotoma/DESCRIPTION
neotoma/NAMESPACE
neotoma/R
neotoma/R/compile_list.R
neotoma/R/get_contacts.R
neotoma/R/get_datasets.R
neotoma/R/get_download.R
neotoma/R/get_publications.R
neotoma/R/get_sites.R
neotoma/R/get_table.R
neotoma/R/get_taxa.R
neotoma/R/pollen.equiv.R
neotoma/R/taxon.table.R
neotoma/R/translate.table.R
neotoma/README.html
neotoma/README.md
neotoma/data
neotoma/data/pollen.equiv.RData
neotoma/data/taxon.list.RData
neotoma/data/translate.table.RData
neotoma/ggmapTemp.png
neotoma/inst
neotoma/inst/doc
neotoma/inst/doc/LabRunthrough.Rmd
neotoma/inst/doc/LabRunthrough.md
neotoma/inst/doc/SGoring_GEOG523Lab_RNeotoma.pdf
neotoma/inst/img
neotoma/inst/img/histogramplot.png
neotoma/inst/img/mammothsites.png
neotoma/man
neotoma/man/compile_list.Rd
neotoma/man/get_contacts.Rd
neotoma/man/get_datasets.Rd
neotoma/man/get_download.Rd
neotoma/man/get_publication.Rd
neotoma/man/get_sites.Rd
neotoma/man/get_table.Rd
neotoma/man/get_taxa.Rd
neotoma/man/pollen.equiv.Rd
neotoma/man/taxon.list.Rd
neotoma/man/translate.table.Rd