neotoma: A Package to access the Neotoma Paleoecological Database using an API.
Version 1.0

The package accesses the Neotoma Paleoecological Database using the published API (http://api.neotomadb.org/). The functions in this package access various pre-built API functions and attempt to return the results from Neotoma in a usable format for researchers and the public.

Browse man pages Browse package API and functions Browse package files

AuthorSimon J. Goring
Date of publication2013-10-29 16:00:00
MaintainerSimon Goring <goring@wisc.edu>
LicenseCC BY-SA 3.0
Version1.0
URL https://github.com/ropensci/neotoma
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("neotoma", repos="http://R-Forge.R-project.org")

Man pages

compile_list: Function to convert assemblage taxa to standardized lists.
get_contacts: A function to obtain contact information for data...
get_datasets: Obtain full datasets from the Neotoma Paleoecological...
get_download: Function to return full dataset records.
get_publication: A file to get publications for sites or datasets in the...
get_sites: Return Site Information.
get_table: Get Neotoma value tables.
get_taxa: Get taxon information from Neotoma.
pollen.equiv: A table to convert the pollen taxa identified by...
taxon.list: Neotoma taxon list
translate.table: A table to convert the original taxa to standardized lists.

Functions

compile_list Man page Source code
get_contacts Man page Source code
get_datasets Man page Source code
get_download Man page Source code
get_publication Man page Source code
get_sites Man page Source code
get_table Man page Source code
get_taxa Man page Source code
pollen.equiv Man page
taxon.list Man page
translate.table Man page

Files

DESCRIPTION
NAMESPACE
R
R/compile_list.R
R/get_contacts.R
R/get_datasets.R
R/get_download.R
R/get_publications.R
R/get_sites.R
R/get_table.R
R/get_taxa.R
R/pollen.equiv.R
R/taxon.table.R
R/translate.table.R
README.html
README.md
data
data/pollen.equiv.RData
data/taxon.list.RData
data/translate.table.RData
ggmapTemp.png
inst
inst/doc
inst/doc/LabRunthrough.Rmd
inst/doc/LabRunthrough.md
inst/doc/SGoring_GEOG523Lab_RNeotoma.pdf
inst/img
inst/img/histogramplot.png
inst/img/mammothsites.png
man
man/compile_list.Rd
man/get_contacts.Rd
man/get_datasets.Rd
man/get_download.Rd
man/get_publication.Rd
man/get_sites.Rd
man/get_table.Rd
man/get_taxa.Rd
man/pollen.equiv.Rd
man/taxon.list.Rd
man/translate.table.Rd
neotoma documentation built on May 21, 2017, 3:28 a.m.