nucim: Function for analysis of nucleus images
In nucim: Nucleus imaging
Author(s)
Volker Schmid
Examples
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if(0){
library(nucim)
f<-"~/projects/marion/Sep17"
N<-7
split.channels(f)
dapimask(f)
classify(f,N)
find.spots(f,"red")
find.spots(f,"green")
compute.distance2border(f,"green",N)
compute.distance2border(f,"red",N)
distance2border.report(f,N)
}
Example output
Loading required package: EBImage
Loading required package: bioimagetools
Bioimagetools 1.1.3
Nucim 1.0.6
nucim documentation built on May 2, 2019, 4:47 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Author(s)
Volker Schmid
Examples
1 2 3 4 5 6 7 8 9 10 11 12 13 | if(0){
library(nucim)
f<-"~/projects/marion/Sep17"
N<-7
split.channels(f)
dapimask(f)
classify(f,N)
find.spots(f,"red")
find.spots(f,"green")
compute.distance2border(f,"green",N)
compute.distance2border(f,"red",N)
distance2border.report(f,N)
}
|
Example output
Loading required package: EBImage
Loading required package: bioimagetools
Bioimagetools 1.1.3
Nucim 1.0.6
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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