pedigreemm: Pedigree-based mixed-effects models
Version 0.3-1

Fit pedigree-based mixed-effects models.

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AuthorDouglas Bates and Ana Ines Vazquez,
Date of publication2017-04-15 02:34:33
MaintainerAna Ines Vazquez <anainesvs@gmail.com>
LicenseGPL (>=2)
Version0.3-1
URL http://pedigreemm.r-forge.r-project.org/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("pedigreemm", repos="http://R-Forge.R-project.org")

Man pages

Dmat: vector of the diagonal for the D matrix from the...
editPed: Complete and Order a Pedigree
getA: Additive Relationship Matrix
getAInv: Inverse of the relationship matrix
inbreeding: Inbreeding coefficients from a pedigree...
mastitis: Mastitis cases in dairy cattle
milk: Milk production
pedCows: Pedigree of the cows in milk
pedCowsR: Pedigree of the cows in milk with 0.70 of the information in...
pedigree: Pedigree Constructor
pedigree-class: Class "pedigree"
pedigreemm: Fit mixed-effects models incorporating pedigrees
pedigreemm-class: Pedigree-based mixed-effects model fits
pedSires: Pedigree of the sires from mastitis
relfactor: Relationship factor from a pedigree...

Functions

Dmat Man page Source code
ZStar Source code
chol,pedigree-method Man page
coerce,pedigree,data.frame-method Man page
coerce,pedigree,sparseMatrix-method Man page
editPed Man page Source code
fitted,pedigreemm-method Man page
getA Man page Source code
getAInv Man page Source code
getGenAncestors Source code
head,pedigree-method Man page
inbreeding Man page Source code
mastitis Man page
milk Man page
ped2DF Source code
pedCows Man page
pedCowsR Man page
pedSires Man page
pedigree Man page Source code
pedigree-class Man page
pedigreemm Man page Source code
pedigreemm-class Man page
pedinbred-class Man page
ranef,pedigreemm-method Man page
relfactor Man page Source code
residuals,pedigreemm-method Man page
show,pedigree-method Man page
tail,pedigree-method Man page

Files

ChangeLog
DESCRIPTION
NAMESPACE
R
R/AllClass.R
R/pedigree.R
data
data/mastitis.rda
data/milk.rda
data/pedCows.rda
data/pedCowsR.rda
data/pedSires.rda
inst
inst/LSi1862_2dig.rda
inst/doc
inst/doc/Methods.txt
man
man/Dmat.Rd
man/editPed.Rd
man/getA.Rd
man/getAInv.Rd
man/inbreeding.Rd
man/mastitis.Rd
man/milk.Rd
man/pedCows.Rd
man/pedCowsR.Rd
man/pedSires.Rd
man/pedigree-class.Rd
man/pedigree.Rd
man/pedigreemm-class.Rd
man/pedigreemm.Rd
man/relfactor.Rd
src
src/init.c
src/pedigree.c
src/pedigree.h
pedigreemm documentation built on May 21, 2017, 1:12 a.m.