MergeTrees: MergeTrees

Description Usage Arguments Author(s) References Examples

View source: R/phrapl-utilities.R

Description

This function merges all the *.tre files in a directory into a single file called "trees.tre". The files must be in newick format. These tree files must have the same label for individuals across all loci. These labels must be the same listed in assignFile ("cladeAssignments.txt").

Usage

1
MergeTrees(treesPath)

Arguments

treesPath

Path to tree files in newick format.

Author(s)

Brian O'Meara, Bryan Carstens, Nathan Jackson, Ariadna Morales-Garcia

Maintainer: Brian O'Meara <[email protected]>

References

O'Meara, B.C., N. Jackson, A. Morales-Garcia, and B. Carstens (2014) Phrapl in prep.

Examples

1
#MergeTrees(treePath="/path_to_tree_files/")

phrapl documentation built on May 2, 2019, 4:52 p.m.