pimdevel: Probabilistic Index Models

Fit a probabilistic index model. This package is the latest version of the pim package, and will end up being pim 2.0. It's a beta currently under development. There's a pim fitting engine with rudimentary functionality, but don't expect any back-compatibility with the previous versions of pim.

Author
Joris Meys, Nick Sabbe, Jan De Neve
Date of publication
2016-02-23 14:51:14
Maintainer
Joris Meys <Joris.Meys@Ugent.be>
License
GPL (>= 2)
Version
1.9.1.18
URLs

View on R-Forge

Man pages

add.poset
Add a poset to a pim.environment object
as.data.frame
Convert a pim.environment to a data frame
classes
Extract information from pim.environment and pim.poset...
coef
Extract the coefficients from a pim or pim.summary object
create.poset
Create a poset
CreateScoreFun
Create a score function for use in a pim.
DysData
This is the Dysphagia data
Engeldata
This is the engel data
estimators
Estimator functions for probabilistic index models
FEVData
This is the Childhood respiratory disease data
formula
Getters for a pim object
getters-pim.formula
Extract information from a pim.formula object
has.intercept
Check whether formula has an explicit intercept
is.complete
Check whether a pim environment is complete
L
Specify the left hand and right hand side of an expression...
make.posfun
Create a poset function
MHData
This is the Mental health data
model.matrix.pim
Create a model matrix for a probabilistic index model
new.pim
Create an object of class pim
new.pim.env
Constructor for a pim.environment
new.pim.formula
Constructor for pim.formula
new.pim.poset
Create a pim.poset environment
nobs
Extract the number of observations
P
Probability function
penv
Extract a pim environment from a model or formula
pim
Fitting a Probabilistic Index Model
pim-class
Class pim
pimdata
The data contained in the pim package
pimdevel-package
Probabilistic Index Models
pim.environment-class
The pim.environment class
pim.fit
Fitter function for a probabilistic index model
pim.formula-class
Class pim.formula
pim-getters
Getters for slots of a pim object
pim.poset-class
The pim.poset class
pim.summary-class
Class pim.summary
poset
Extract the poset as a matrix or list
print
Print methods for the different object types
response
Extract response from a pim.formula
sandwich.estimator
Pseudo-observation variance sandwich estimator
SUData
This is the Surgical unit data
summary.pim
The summary function for the pim class
vcov
Methods for vcov
vcov.estimators
vcov estimators for pim
vcov.internal
Internal functions for vcov estimation

Files in this package

pimdevel/DESCRIPTION
pimdevel/NAMESPACE
pimdevel/R
pimdevel/R/CreateScoreFun.R
pimdevel/R/DysData.R
pimdevel/R/Engeldata.R
pimdevel/R/Estimators.R
pimdevel/R/FEVData.R
pimdevel/R/Getters.R
pimdevel/R/Getters_pim.R
pimdevel/R/Getters_pim.formula.R
pimdevel/R/InternalFunctions.R
pimdevel/R/InternalObjects.R
pimdevel/R/LR.R
pimdevel/R/MHData.R
pimdevel/R/P.R
pimdevel/R/SUData.R
pimdevel/R/add.poset.R
pimdevel/R/as.data.frame.pim.environment.R
pimdevel/R/coef.R
pimdevel/R/create.poset.R
pimdevel/R/formula.R
pimdevel/R/has.intercept.R
pimdevel/R/is.complete.R
pimdevel/R/make.posfun.R
pimdevel/R/model.matrix.pim.R
pimdevel/R/new.pim.R
pimdevel/R/new.pim.env.R
pimdevel/R/new.pim.formula.R
pimdevel/R/new.pim.poset.R
pimdevel/R/nobs.R
pimdevel/R/penv.R
pimdevel/R/pim-class.R
pimdevel/R/pim.R
pimdevel/R/pim.environment-class.R
pimdevel/R/pim.fit.R
pimdevel/R/pim.formula-class.R
pimdevel/R/pim.poset-class.R
pimdevel/R/pim.summary-class.R
pimdevel/R/pimdata.R
pimdevel/R/pimdevel-package.R
pimdevel/R/poset.R
pimdevel/R/print.R
pimdevel/R/response.R
pimdevel/R/sandwich.estimator.R
pimdevel/R/summary.R
pimdevel/R/vcov.R
pimdevel/R/vcov.estimators.R
pimdevel/R/vcov.internal.R
pimdevel/build
pimdevel/build/vignette.rds
pimdevel/data
pimdevel/data/DysData.rda
pimdevel/data/Engeldata.rda
pimdevel/data/FEVData.rda
pimdevel/data/MHData.rda
pimdevel/data/SUData.rda
pimdevel/inst
pimdevel/inst/doc
pimdevel/inst/doc/pim-technical.Rnw
pimdevel/inst/doc/pim-technical.pdf
pimdevel/man
pimdevel/man/CreateScoreFun.Rd
pimdevel/man/DysData.Rd
pimdevel/man/Engeldata.Rd
pimdevel/man/FEVData.Rd
pimdevel/man/L.Rd
pimdevel/man/MHData.Rd
pimdevel/man/P.Rd
pimdevel/man/SUData.Rd
pimdevel/man/add.poset.Rd
pimdevel/man/as.data.frame.Rd
pimdevel/man/classes.Rd
pimdevel/man/coef.Rd
pimdevel/man/create.poset.Rd
pimdevel/man/estimators.Rd
pimdevel/man/formula.Rd
pimdevel/man/getters-pim.formula.Rd
pimdevel/man/has.intercept.Rd
pimdevel/man/is.complete.Rd
pimdevel/man/make.posfun.Rd
pimdevel/man/model.matrix.pim.Rd
pimdevel/man/new.pim.Rd
pimdevel/man/new.pim.env.Rd
pimdevel/man/new.pim.formula.Rd
pimdevel/man/new.pim.poset.Rd
pimdevel/man/nobs.Rd
pimdevel/man/penv.Rd
pimdevel/man/pim-class.Rd
pimdevel/man/pim-getters.Rd
pimdevel/man/pim.Rd
pimdevel/man/pim.environment-class.Rd
pimdevel/man/pim.fit.Rd
pimdevel/man/pim.formula-class.Rd
pimdevel/man/pim.poset-class.Rd
pimdevel/man/pim.summary-class.Rd
pimdevel/man/pimdata.Rd
pimdevel/man/pimdevel-package.Rd
pimdevel/man/poset.Rd
pimdevel/man/print.Rd
pimdevel/man/response.Rd
pimdevel/man/sandwich.estimator.Rd
pimdevel/man/summary.pim.Rd
pimdevel/man/vcov.Rd
pimdevel/man/vcov.estimators.Rd
pimdevel/man/vcov.internal.Rd
pimdevel/tests
pimdevel/tests/testthat
pimdevel/tests/testthat.R
pimdevel/tests/testthat/test_pim.environments.R
pimdevel/vignettes
pimdevel/vignettes/pim-technical.Rnw