pimdevel: Probabilistic Index Models
Version 1.9.1.18

Fit a probabilistic index model. This package is the latest version of the pim package, and will end up being pim 2.0. It's a beta currently under development. There's a pim fitting engine with rudimentary functionality, but don't expect any back-compatibility with the previous versions of pim.

Browse man pages Browse package API and functions Browse package files

AuthorJoris Meys, Nick Sabbe, Jan De Neve
Date of publication2016-02-23 14:51:14
MaintainerJoris Meys <Joris.Meys@Ugent.be>
LicenseGPL (>= 2)
Version1.9.1.18
URL NA
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("pimdevel", repos="http://R-Forge.R-project.org")

Man pages

add.poset: Add a poset to a pim.environment object
as.data.frame: Convert a pim.environment to a data frame
classes: Extract information from pim.environment and pim.poset...
coef: Extract the coefficients from a pim or pim.summary object
create.poset: Create a poset
CreateScoreFun: Create a score function for use in a pim.
DysData: This is the Dysphagia data
Engeldata: This is the engel data
estimators: Estimator functions for probabilistic index models
FEVData: This is the Childhood respiratory disease data
formula: Getters for a pim object
getters-pim.formula: Extract information from a pim.formula object
has.intercept: Check whether formula has an explicit intercept
is.complete: Check whether a pim environment is complete
L: Specify the left hand and right hand side of an expression...
make.posfun: Create a poset function
MHData: This is the Mental health data
model.matrix.pim: Create a model matrix for a probabilistic index model
new.pim: Create an object of class pim
new.pim.env: Constructor for a pim.environment
new.pim.formula: Constructor for pim.formula
new.pim.poset: Create a pim.poset environment
nobs: Extract the number of observations
P: Probability function
penv: Extract a pim environment from a model or formula
pim: Fitting a Probabilistic Index Model
pim-class: Class pim
pimdata: The data contained in the pim package
pimdevel-package: Probabilistic Index Models
pim.environment-class: The pim.environment class
pim.fit: Fitter function for a probabilistic index model
pim.formula-class: Class pim.formula
pim-getters: Getters for slots of a pim object
pim.poset-class: The pim.poset class
pim.summary-class: Class pim.summary
poset: Extract the poset as a matrix or list
print: Print methods for the different object types
response: Extract response from a pim.formula
sandwich.estimator: Pseudo-observation variance sandwich estimator
SUData: This is the Surgical unit data
summary.pim: The summary function for the pim class
vcov: Methods for vcov
vcov.estimators: vcov estimators for pim
vcov.internal: Internal functions for vcov estimation

Functions

.make.posfun Man page
CreateScoreFun Man page Source code
DysData Man page
Engeldata Man page
FEVData Man page
L Man page Source code
MHData Man page
P Man page Source code
PO Man page Source code
PP Man page Source code
R Man page Source code
SUData Man page
U.sandwich Man page Source code
U.score Man page Source code
add.poset Man page
add.poset,pim.environment-method Man page
as.data.frame Man page
as.data.frame,pim.environment-method Man page
as.data.frame.pim.environment Source code
as.language Source code
catch.noninteger.handler Source code
classes Man page
classes,pim.environment-method Man page
coef Man page
coef,pim-method Man page
coef,pim.summary-method Man page
compare Man page
compare,pim.environment-method Man page
compare,pim.poset-method Man page
create.poset Man page Source code
equal.lengths Source code
equal.nobs Source code
estimator.BB Man page Source code
estimator.glm Man page Source code
estimator.nleqslv Man page Source code
estimators Man page
fitted Man page
fitted,pim-method Man page
fitted.pim Source code
formula Man page
formula,pim-method Man page
formula,pim.formula-method Man page
formula.pim Source code
formula.pim.formula Source code
get.classes Source code
has.intercept Man page
has.intercept,character-method Man page
has.intercept,formula-method Man page
has.intercept,pim-method Man page
has.intercept,pim.formula-method Man page
has.intercept,terms-method Man page
has.specials Man page
has.specials,pim.formula-method Man page
is.complete Man page Source code
is.variable Source code
keep.data Man page Source code
lhs Man page
lhs, Man page
lhs,pim.formula-method Man page
lpaste Source code
make.posfun Source code
model.matrix Man page
model.matrix, Man page
model.matrix,pim-method Man page
model.matrix,pim.formula-method Man page
model.matrix.pim.formula Man page Source code
names, Man page
names,pim.environment-method Man page
names,pim.poset-method Man page
new.pim Man page Source code
new.pim.env Man page Source code
new.pim.env,ANY-method Man page
new.pim.env,data.frame-method Man page
new.pim.env,environment-method Man page
new.pim.env,list-method Man page
new.pim.env,missing-method Man page
new.pim.formula Man page
new.pim.formula,formula,ANY-method Man page
new.pim.formula,formula,pim.environment-method Man page
new.pim.poset Man page
new.pim.poset,character,numeric-method Man page
new.pim.poset,list,missing-method Man page
new.pim.poset,list,numeric-method Man page
new.pim.poset,matrix,missing-method Man page
new.pim.poset,matrix,numeric-method Man page
new.pim.poset,missing,numeric-method Man page
nobs,data.frame-method Man page
nobs,matrix-method Man page
nobs,pim.environment-method Man page
nobs,pim.poset-method Man page
penv Man page
penv,pim-method Man page
penv,pim.formula-method Man page
pim Man page Source code
pim-class Man page
pim.environment Man page
pim.environment-class Man page
pim.fit Man page Source code
pim.formula Man page
pim.formula-class Man page
pim.poset Man page
pim.poset-class Man page
pim.summary-class Man page
pimdata Man page
pimdevel-package Man page
poset Man page
poset,environment-method Man page
poset,pim-method Man page
poset,pim.environment-method Man page
poset,pim.formula-method Man page
poset,pim.poset-method Man page
print Man page
print,pim-method Man page
print,pim.environment-method Man page
print,pim.formula-method Man page
print,pim.poset-method Man page
print.pim Source code
print.pim.environment Source code
print.pim.formula Source code
print.pim.poset Source code
print.pim.summary Source code
remove.pars Source code
response Man page
response,pim-method Man page
response,pim.formula-method Man page
same.classes Source code
same.elements Source code
sandwich.estimator Man page Source code
sandwich.vcov Man page Source code
score.estimator Man page
score.vcov Man page Source code
summary Man page
summary,pim-method Man page
summary.pim Source code
terms Man page
terms, Man page
terms,pim.formula-method Man page
valid.classes Source code
vcov Man page
vcov,list-method Man page
vcov,pim-method Man page
vcov.estimators Man page
vcov.internal Man page
vcov.list Source code
vcov.pim Source code

Files

DESCRIPTION
NAMESPACE
R
R/CreateScoreFun.R
R/DysData.R
R/Engeldata.R
R/Estimators.R
R/FEVData.R
R/Getters.R
R/Getters_pim.R
R/Getters_pim.formula.R
R/InternalFunctions.R
R/InternalObjects.R
R/LR.R
R/MHData.R
R/P.R
R/SUData.R
R/add.poset.R
R/as.data.frame.pim.environment.R
R/coef.R
R/create.poset.R
R/formula.R
R/has.intercept.R
R/is.complete.R
R/make.posfun.R
R/model.matrix.pim.R
R/new.pim.R
R/new.pim.env.R
R/new.pim.formula.R
R/new.pim.poset.R
R/nobs.R
R/penv.R
R/pim-class.R
R/pim.R
R/pim.environment-class.R
R/pim.fit.R
R/pim.formula-class.R
R/pim.poset-class.R
R/pim.summary-class.R
R/pimdata.R
R/pimdevel-package.R
R/poset.R
R/print.R
R/response.R
R/sandwich.estimator.R
R/summary.R
R/vcov.R
R/vcov.estimators.R
R/vcov.internal.R
build
build/vignette.rds
data
data/DysData.rda
data/Engeldata.rda
data/FEVData.rda
data/MHData.rda
data/SUData.rda
inst
inst/doc
inst/doc/pim-technical.Rnw
inst/doc/pim-technical.pdf
man
man/CreateScoreFun.Rd
man/DysData.Rd
man/Engeldata.Rd
man/FEVData.Rd
man/L.Rd
man/MHData.Rd
man/P.Rd
man/SUData.Rd
man/add.poset.Rd
man/as.data.frame.Rd
man/classes.Rd
man/coef.Rd
man/create.poset.Rd
man/estimators.Rd
man/formula.Rd
man/getters-pim.formula.Rd
man/has.intercept.Rd
man/is.complete.Rd
man/make.posfun.Rd
man/model.matrix.pim.Rd
man/new.pim.Rd
man/new.pim.env.Rd
man/new.pim.formula.Rd
man/new.pim.poset.Rd
man/nobs.Rd
man/penv.Rd
man/pim-class.Rd
man/pim-getters.Rd
man/pim.Rd
man/pim.environment-class.Rd
man/pim.fit.Rd
man/pim.formula-class.Rd
man/pim.poset-class.Rd
man/pim.summary-class.Rd
man/pimdata.Rd
man/pimdevel-package.Rd
man/poset.Rd
man/print.Rd
man/response.Rd
man/sandwich.estimator.Rd
man/summary.pim.Rd
man/vcov.Rd
man/vcov.estimators.Rd
man/vcov.internal.Rd
tests
tests/testthat
tests/testthat.R
tests/testthat/test_pim.environments.R
vignettes
vignettes/pim-technical.Rnw
pimdevel documentation built on May 21, 2017, 12:56 a.m.