Description Usage Arguments Format Examples
setBiocMirror
sets all Bioconductor repositories
(software, data, annotation, etc.). so that they are
directly available to install.packages
. It
differs from chooseBioCmirror
in that it
effectively enables the repositories.
getBiocMirror
is a shortcut for
getOption('BioC_mirror')
, which returns the
current Bioconductor mirror as used by biocLite
.
getBiocRepos
returns urls to all Bioconductor
repositories on a given mirror.
setCRANMirror
sets the preferred CRAN mirror.
CRAN
simply contains the url of CRAN main mirror
(http://cran.r-project.org), and aims at
simplifying its use, e.g., in calls to
install.packages
.
1 2 3 4 5 6 7 8 9 10 11 | setBiocMirror(url = "http://www.bioconductor.org",
version = NULL, unique = TRUE)
getBiocMirror()
getBiocRepos(url = "http://www.bioconductor.org",
version = NULL)
setCRANMirror(url = CRAN, unique = TRUE)
CRAN
|
url |
or Bioconductor mirror url |
version |
version number |
unique |
logical that indicate if duplicated urls or names should be removed. |
chr "http://cran.r-project.org"
1 2 3 4 | ## Not run:
install.packages('pkgmaker', repos=CRAN)
## End(Not run)
|
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