qaqc: QAQC of DICOM Header Information

In qaqc: Quality Assurance and Quality Control Procedures for DICOM Data

Description

Quality assurance and quality control checks are applied to a collection of DICOM data sets.

Usage

qaqc(subject, visit, exam, setup, pixelData = TRUE, domain = "/usr/cic/apps/bin/domain", verbose = FALSE, ...)

Arguments

subject	is a list of subject IDs (obtained from Domain).
visit	is a list of visit IDs (obtained from Domain).
exam	is a list of exam IDs (obtained from Domain).
setup	is a list of parameter values required for input/output of the QAQC process. The following parameters are provided: today is the date in YYYY-MM-DD format. domDate is the date in DD.MM.YYY format. study is a character string for the study ID. logFile is a character string for the log file. domFile is the path to the. dicom is the path to the Domain download directory. nifti is the path to the NIfTI directory. All dicom-to-nifti conversions will be placed in this directory. shared.area is an alternative location for the HTML output (intended to be a Windows-based shared area). compare is the user-specified file for verifyHeader. emailList is an email address for the notification to be sent. mailText is a character string containg the body of the email message. css is the name of the CSS file.
pixelData	is a flag to determine if pixel data will be uploaded from the DICOM files (default = TRUE).
domain	is the path to the Domain executable.
verbose	is a flag to provide verbose output.
...	is for additional parameters to be sent to dicomSeparate().

Details

TBD.

Value

No object is returned from this function. An HTML file will be produced for each (subject,visit,exam) triplet and the corresponding paths to these files are emailed to the user.

Author(s)

Brandon Whitcher [e-mail]

See Also

dicom2nifti, dicomSeparate, verifyHeader

qaqc documentation built on May 2, 2019, 5:46 p.m.