related: related: an R package for analyzing pairwise relatedness data based on codominant molecular markers

Provides functions for calculating relatedness from codominant genetic data using any or all of seven estimators, and includes options for considering inbreeding and genotyping errors, and can estimate 95% confidence intervals. Also includes simulation options for comparing the performance of different estimators on a given data set and estimating the expected resolution given a particular data set.

AuthorJack Pew, Jinliang Wang, Paul Muir, and Tim Frasier
Date of publication2014-04-16 18:40:57
MaintainerTim Frasier <timothy.frasier@smu.ca>
LicenseGPL (>= 2)
Version0.8

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Files in this package

related/DESCRIPTION
related/NAMESPACE
related/R
related/R/related.R
related/README
related/data
related/data/GenotypeData.rda
related/man
related/man/GenotypeData.Rd related/man/cleanuprvals.Rd related/man/coancestry.Rd related/man/compareestimators.Rd related/man/familysim.Rd related/man/readgenotypedata.Rd related/man/readrelatedoutput.Rd related/man/related-package.Rd
related/src
related/src/family_sim.c
related/src/ibdvariables.mod
related/src/related.f90
related/src/related.h
related/src/variables.mod
related/src/wangvariables.mod
related/vignettes
related/vignettes/related_tutorial.pdf

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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