rhr: Package to estimate home ranges through a graphical user interface.

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In this package several methods to analyze animal movement data and home range estimation are implemented or wrapped from other packages.

Author
Johannes Signer
Date of publication
2013-11-09 17:04:08
Maintainer
Johannes Signer <jmsigner@gmail.com>
License
GPL-3
Version
0.04
URLs

View on R-Forge

Man pages

code
code
cud
Retrives the CUD of an rhrHREstimator object
cud.RhrHREstimator
Retrives the CUD of an rhrHREstimator object
dat
get data from RhrHREstimator
datSH
Tracking data of one red deer in Germany
dfGrob
dfGrob
fidelityBase
Base function to calculate msd and li
h1
h1
h2
h2
h3
h3
h4
h4
hasCUD
Checks if an rhrEstimator posses a cud
hasCUD.RhrHREstimator
Checks if an rhrEstimator posses a cud
hasIsopleths
Checks if an rhrEstimator posses isopleths
hasIsopleths.RhrHREstimator
Check if isopleths are available
hasUD
Checks if an rhrEstimator posses an ud
hasUD.RhrHREstimator
Checks if an rhrEstimator posses a ud
img
img
isopleths
Retrives the isopleths of an rhrHREstimator object
isopleths.RhrHREstimator
get the isopleths from rhrHREstimator
p
p
parameters
Retrieves parameters from estimator
parameters.RhrHREstimator
Retrieves parameters of an object of class RhrHREstimator
plot.RhrHRAsymptote
plot for RhrHRAsymptote
plot.RhrHRCoreArea
plot for RhrHRCoreArea
plot.RhrHREstimator
plot for RhrHREstimator
plot.RhrTTSI
plot for RhrTTSI
plotTTSI
plot ttsi
print.RhrHRAsymptote
print object of rhrHRAsymptote
print.RhrHREstimator
print for RhrHREstimator
print.RhrTTSI
print object of rhrTTSI
printSpRestriction
printSpRestriction
printTemporalRestriction
printTemporalRestriction
rasterFromXYVect
rasterFromXYVect
rhrAlert
rhrAlert Wraps a character as html 'div' with appropriate...
rhrArea
Get areas from object of class RhrHREstimator
rhrAsymptote
Calculate home rnage asymptote for an object of class...
rhrConvertUnit
rhrConvertUnit
rhrCoreArea
Estimate Core Area
rhrCoreArea.RhrHREstimator
Core area for home range estimator
rhrCorrectLevels
rhrCorrectLevels
rhrEstimator
Function to calculate a home range estimator
rhrEstimatorCharacteristic
Function to calculate characteristics of an estimator (i.e....
rhrFidelity
Site fidelity
rhrGUI
GUI
rhrHlscv
Calcualte least square cross validation bandwidth
rhrHpi
Estimate bandwidth with plug in the equation
rhrHref
Calcualte reference bandwidth
rhrHREstimator
rhrHREstimator
rhrKDE
Kernel Density Estimation (KDE)
rhrLoCoH
Local Convex Hull (LoCoH)
rhrMCP
Minimum Convex Polygon (MCP)
rhrSchoener
Schoener's ratio
rhrSetCUD
Generic Function to set CUD
rhrSetCUD.RhrHREstimator
Set the CUD
rhrSetIso
Set the Set isopleth
rhrSetIso.RhrHREstimator
Set isopleth
rhrSetUD
Generic Function to set UD
rhrSetUD.RhrHREstimator
Set the UD
rhrToHTML
rhrToHTML
rhrTTSI
rhrTTSI
strShorten
strShorten
summaryGrob
summaryGrob
toHTML
toHTML: convert R objects as html
ttestGrob
ttestGrob
ud
Retrives the UD of an rhrHREstimator object
ud.RhrHREstimator
Get the UD

Files in this package

rhr/ChangeLog
rhr/DESCRIPTION
rhr/NAMESPACE
rhr/R
rhr/R/dat.R
rhr/R/datSH-data.R
rhr/R/fidelity.R
rhr/R/isopleths.R
rhr/R/parameters.R
rhr/R/plot.RhrHREstimator.R
rhr/R/rhrAlert.R
rhr/R/rhrArea.R
rhr/R/rhrAsymptote.R
rhr/R/rhrConvertUnit.R
rhr/R/rhrCoreArea.R
rhr/R/rhrCorrectLevels.R
rhr/R/rhrEstKDE.R
rhr/R/rhrEstLoCoH.R
rhr/R/rhrEstMCP.R
rhr/R/rhrEstimator.R
rhr/R/rhrEstimatorCharacteristic.R
rhr/R/rhrGUI.R
rhr/R/rhrHelperFunctions.R
rhr/R/rhrHpi.R
rhr/R/rhrHref.R
rhr/R/rhrLSCV.R
rhr/R/rhrSchoener.R
rhr/R/rhrTTSI.R
rhr/R/zzz.R
rhr/data
rhr/data/datSH.rda
rhr/inst
rhr/inst/app
rhr/inst/app/README
rhr/inst/app/brew
rhr/inst/app/brew/analyze.rhtml
rhr/inst/app/brew/configC2S.rhtml
rhr/inst/app/brew/configS2C.rhtml
rhr/inst/app/brew/initConfig.R
rhr/inst/app/brew/load.rhtml
rhr/inst/app/brew/rAsymptote.R
rhr/inst/app/brew/rCA.R
rhr/inst/app/brew/rKDE.R
rhr/inst/app/brew/rLoCoH.R
rhr/inst/app/brew/rMCP.R
rhr/inst/app/brew/rParams.R
rhr/inst/app/brew/rPost.R
rhr/inst/app/brew/rPrep.R
rhr/inst/app/brew/rSiteFidelity.R
rhr/inst/app/brew/rTTSI.R
rhr/inst/app/brew/reMap.R
rhr/inst/app/brew/reMapRes.rhtml
rhr/inst/app/brew/restriction.R
rhr/inst/app/brew/spRestriction.rhtml
rhr/inst/app/brew/syncConfig.rhtml
rhr/inst/app/brew/temporalRestriction.rhtml
rhr/inst/app/brew/updateConfig.rhtml
rhr/inst/app/config.R
rhr/inst/app/css
rhr/inst/app/css/bootstrap.min.css
rhr/inst/app/img
rhr/inst/app/img/glyphicons-halflings-white.png
rhr/inst/app/img/glyphicons-halflings.png
rhr/inst/app/img/loader.gif
rhr/inst/app/js
rhr/inst/app/js/bootstrap.min.js
rhr/inst/app/js/jquery.validate.min.js
rhr/inst/app/js/jquery18.min.js
rhr/inst/app/js/rhr.js
rhr/inst/app/js/rhrResults.js
rhr/inst/tests
rhr/inst/tests/rhrMCP.R
rhr/inst/tests/run-all.R
rhr/inst/tests/test-rhrFidelity.R
rhr/man
rhr/man/code.Rd
rhr/man/cud.Rd
rhr/man/cud.RhrHREstimator.Rd
rhr/man/dat.Rd
rhr/man/datSH.Rd
rhr/man/dfGrob.Rd
rhr/man/fidelityBase.Rd
rhr/man/h1.Rd
rhr/man/h2.Rd
rhr/man/h3.Rd
rhr/man/h4.Rd
rhr/man/hasCUD.Rd
rhr/man/hasCUD.RhrHREstimator.Rd
rhr/man/hasIsopleths.Rd
rhr/man/hasIsopleths.RhrHREstimator.Rd
rhr/man/hasUD.Rd
rhr/man/hasUD.RhrHREstimator.Rd
rhr/man/img.Rd
rhr/man/isopleths.Rd
rhr/man/isopleths.RhrHREstimator.Rd
rhr/man/p.Rd
rhr/man/parameters.Rd
rhr/man/parameters.RhrHREstimator.Rd
rhr/man/plot.RhrHRAsymptote.Rd
rhr/man/plot.RhrHRCoreArea.Rd
rhr/man/plot.RhrHREstimator.Rd
rhr/man/plot.RhrTTSI.Rd
rhr/man/plotTTSI.Rd
rhr/man/print.RhrHRAsymptote.Rd
rhr/man/print.RhrHREstimator.Rd
rhr/man/print.RhrTTSI.Rd
rhr/man/printSpRestriction.Rd
rhr/man/printTemporalRestriction.Rd
rhr/man/rasterFromXYVect.Rd
rhr/man/rhrAlert.Rd
rhr/man/rhrArea.Rd
rhr/man/rhrAsymptote.Rd
rhr/man/rhrConvertUnit.Rd
rhr/man/rhrCoreArea.Rd
rhr/man/rhrCoreArea.RhrHREstimator.Rd
rhr/man/rhrCorrectLevels.Rd
rhr/man/rhrEstimator.Rd
rhr/man/rhrEstimatorCharacteristic.Rd
rhr/man/rhrFidelity.Rd
rhr/man/rhrGUI.Rd
rhr/man/rhrHREstimator.Rd
rhr/man/rhrHlscv.Rd
rhr/man/rhrHpi.Rd
rhr/man/rhrHref.Rd
rhr/man/rhrKDE.Rd
rhr/man/rhrLoCoH.Rd
rhr/man/rhrMCP.Rd
rhr/man/rhrSchoener.Rd
rhr/man/rhrSetCUD.Rd
rhr/man/rhrSetCUD.RhrHREstimator.Rd
rhr/man/rhrSetIso.Rd
rhr/man/rhrSetIso.RhrHREstimator.Rd
rhr/man/rhrSetUD.Rd
rhr/man/rhrSetUD.RhrHREstimator.Rd
rhr/man/rhrTTSI.Rd
rhr/man/rhrToHTML.Rd
rhr/man/strShorten.Rd
rhr/man/summaryGrob.Rd
rhr/man/toHTML.Rd
rhr/man/ttestGrob.Rd
rhr/man/ud.Rd
rhr/man/ud.RhrHREstimator.Rd
rhr/src
rhr/src/Makevars
rhr/src/Makevars.win
rhr/src/kdelscv.cpp
rhr/src/msd.cpp
rhr/src/pd.cpp
rhr/src/randomWalk.cpp
rhr/src/t2cpp.cpp
rhr/src/t2cpp.h
rhr/test
rhr/test/utSchoener.R