rhr: Package to estimate home ranges through a graphical user interface.

In this package several methods to analyze animal movement data and home range estimation are implemented or wrapped from other packages.

AuthorJohannes Signer
Date of publication2013-11-09 17:04:08
MaintainerJohannes Signer <jmsigner@gmail.com>
LicenseGPL-3
Version0.04
http://www.quantwild.de/rhr

View on R-Forge

Man pages

code: code

cud: Retrives the CUD of an rhrHREstimator object

cud.RhrHREstimator: Retrives the CUD of an rhrHREstimator object

dat: get data from RhrHREstimator

datSH: Tracking data of one red deer in Germany

dfGrob: dfGrob

fidelityBase: Base function to calculate msd and li

h1: h1

h2: h2

h3: h3

h4: h4

hasCUD: Checks if an rhrEstimator posses a cud

hasCUD.RhrHREstimator: Checks if an rhrEstimator posses a cud

hasIsopleths: Checks if an rhrEstimator posses isopleths

hasIsopleths.RhrHREstimator: Check if isopleths are available

hasUD: Checks if an rhrEstimator posses an ud

hasUD.RhrHREstimator: Checks if an rhrEstimator posses a ud

img: img

isopleths: Retrives the isopleths of an rhrHREstimator object

isopleths.RhrHREstimator: get the isopleths from rhrHREstimator

p: p

parameters: Retrieves parameters from estimator

parameters.RhrHREstimator: Retrieves parameters of an object of class RhrHREstimator

plot.RhrHRAsymptote: plot for RhrHRAsymptote

plot.RhrHRCoreArea: plot for RhrHRCoreArea

plot.RhrHREstimator: plot for RhrHREstimator

plot.RhrTTSI: plot for RhrTTSI

plotTTSI: plot ttsi

print.RhrHRAsymptote: print object of rhrHRAsymptote

print.RhrHREstimator: print for RhrHREstimator

print.RhrTTSI: print object of rhrTTSI

printSpRestriction: printSpRestriction

printTemporalRestriction: printTemporalRestriction

rasterFromXYVect: rasterFromXYVect

rhrAlert: rhrAlert Wraps a character as html 'div' with appropriate...

rhrArea: Get areas from object of class RhrHREstimator

rhrAsymptote: Calculate home rnage asymptote for an object of class...

rhrConvertUnit: rhrConvertUnit

rhrCoreArea: Estimate Core Area

rhrCoreArea.RhrHREstimator: Core area for home range estimator

rhrCorrectLevels: rhrCorrectLevels

rhrEstimator: Function to calculate a home range estimator

rhrEstimatorCharacteristic: Function to calculate characteristics of an estimator (i.e....

rhrFidelity: Site fidelity

rhrGUI: GUI

rhrHlscv: Calcualte least square cross validation bandwidth

rhrHpi: Estimate bandwidth with plug in the equation

rhrHref: Calcualte reference bandwidth

rhrHREstimator: rhrHREstimator

rhrKDE: Kernel Density Estimation (KDE)

rhrLoCoH: Local Convex Hull (LoCoH)

rhrMCP: Minimum Convex Polygon (MCP)

rhrSchoener: Schoener's ratio

rhrSetCUD: Generic Function to set CUD

rhrSetCUD.RhrHREstimator: Set the CUD

rhrSetIso: Set the Set isopleth

rhrSetIso.RhrHREstimator: Set isopleth

rhrSetUD: Generic Function to set UD

rhrSetUD.RhrHREstimator: Set the UD

rhrToHTML: rhrToHTML

rhrTTSI: rhrTTSI

strShorten: strShorten

summaryGrob: summaryGrob

toHTML: toHTML: convert R objects as html

ttestGrob: ttestGrob

ud: Retrives the UD of an rhrHREstimator object

ud.RhrHREstimator: Get the UD

Files in this package

rhr/ChangeLog
rhr/DESCRIPTION
rhr/NAMESPACE
rhr/R
rhr/R/dat.R rhr/R/datSH-data.R rhr/R/fidelity.R rhr/R/isopleths.R rhr/R/parameters.R rhr/R/plot.RhrHREstimator.R rhr/R/rhrAlert.R rhr/R/rhrArea.R rhr/R/rhrAsymptote.R rhr/R/rhrConvertUnit.R rhr/R/rhrCoreArea.R rhr/R/rhrCorrectLevels.R rhr/R/rhrEstKDE.R rhr/R/rhrEstLoCoH.R rhr/R/rhrEstMCP.R rhr/R/rhrEstimator.R rhr/R/rhrEstimatorCharacteristic.R rhr/R/rhrGUI.R rhr/R/rhrHelperFunctions.R rhr/R/rhrHpi.R rhr/R/rhrHref.R rhr/R/rhrLSCV.R rhr/R/rhrSchoener.R rhr/R/rhrTTSI.R rhr/R/zzz.R
rhr/data
rhr/data/datSH.rda
rhr/inst
rhr/inst/app
rhr/inst/app/README
rhr/inst/app/brew
rhr/inst/app/brew/analyze.rhtml
rhr/inst/app/brew/configC2S.rhtml
rhr/inst/app/brew/configS2C.rhtml
rhr/inst/app/brew/initConfig.R
rhr/inst/app/brew/load.rhtml
rhr/inst/app/brew/rAsymptote.R
rhr/inst/app/brew/rCA.R
rhr/inst/app/brew/rKDE.R
rhr/inst/app/brew/rLoCoH.R
rhr/inst/app/brew/rMCP.R
rhr/inst/app/brew/rParams.R
rhr/inst/app/brew/rPost.R
rhr/inst/app/brew/rPrep.R
rhr/inst/app/brew/rSiteFidelity.R
rhr/inst/app/brew/rTTSI.R
rhr/inst/app/brew/reMap.R
rhr/inst/app/brew/reMapRes.rhtml
rhr/inst/app/brew/restriction.R
rhr/inst/app/brew/spRestriction.rhtml
rhr/inst/app/brew/syncConfig.rhtml
rhr/inst/app/brew/temporalRestriction.rhtml
rhr/inst/app/brew/updateConfig.rhtml
rhr/inst/app/config.R
rhr/inst/app/css
rhr/inst/app/css/bootstrap.min.css
rhr/inst/app/img
rhr/inst/app/img/glyphicons-halflings-white.png
rhr/inst/app/img/glyphicons-halflings.png
rhr/inst/app/img/loader.gif
rhr/inst/app/js
rhr/inst/app/js/bootstrap.min.js
rhr/inst/app/js/jquery.validate.min.js
rhr/inst/app/js/jquery18.min.js
rhr/inst/app/js/rhr.js
rhr/inst/app/js/rhrResults.js
rhr/inst/tests
rhr/inst/tests/rhrMCP.R
rhr/inst/tests/run-all.R
rhr/inst/tests/test-rhrFidelity.R
rhr/man
rhr/man/code.Rd rhr/man/cud.Rd rhr/man/cud.RhrHREstimator.Rd rhr/man/dat.Rd rhr/man/datSH.Rd rhr/man/dfGrob.Rd rhr/man/fidelityBase.Rd rhr/man/h1.Rd rhr/man/h2.Rd rhr/man/h3.Rd rhr/man/h4.Rd rhr/man/hasCUD.Rd rhr/man/hasCUD.RhrHREstimator.Rd rhr/man/hasIsopleths.Rd rhr/man/hasIsopleths.RhrHREstimator.Rd rhr/man/hasUD.Rd rhr/man/hasUD.RhrHREstimator.Rd rhr/man/img.Rd rhr/man/isopleths.Rd rhr/man/isopleths.RhrHREstimator.Rd rhr/man/p.Rd rhr/man/parameters.Rd rhr/man/parameters.RhrHREstimator.Rd rhr/man/plot.RhrHRAsymptote.Rd rhr/man/plot.RhrHRCoreArea.Rd rhr/man/plot.RhrHREstimator.Rd rhr/man/plot.RhrTTSI.Rd rhr/man/plotTTSI.Rd rhr/man/print.RhrHRAsymptote.Rd rhr/man/print.RhrHREstimator.Rd rhr/man/print.RhrTTSI.Rd rhr/man/printSpRestriction.Rd rhr/man/printTemporalRestriction.Rd rhr/man/rasterFromXYVect.Rd rhr/man/rhrAlert.Rd rhr/man/rhrArea.Rd rhr/man/rhrAsymptote.Rd rhr/man/rhrConvertUnit.Rd rhr/man/rhrCoreArea.Rd rhr/man/rhrCoreArea.RhrHREstimator.Rd rhr/man/rhrCorrectLevels.Rd rhr/man/rhrEstimator.Rd rhr/man/rhrEstimatorCharacteristic.Rd rhr/man/rhrFidelity.Rd rhr/man/rhrGUI.Rd rhr/man/rhrHREstimator.Rd rhr/man/rhrHlscv.Rd rhr/man/rhrHpi.Rd rhr/man/rhrHref.Rd rhr/man/rhrKDE.Rd rhr/man/rhrLoCoH.Rd rhr/man/rhrMCP.Rd rhr/man/rhrSchoener.Rd rhr/man/rhrSetCUD.Rd rhr/man/rhrSetCUD.RhrHREstimator.Rd rhr/man/rhrSetIso.Rd rhr/man/rhrSetIso.RhrHREstimator.Rd rhr/man/rhrSetUD.Rd rhr/man/rhrSetUD.RhrHREstimator.Rd rhr/man/rhrTTSI.Rd rhr/man/rhrToHTML.Rd rhr/man/strShorten.Rd rhr/man/summaryGrob.Rd rhr/man/toHTML.Rd rhr/man/ttestGrob.Rd rhr/man/ud.Rd rhr/man/ud.RhrHREstimator.Rd
rhr/src
rhr/src/Makevars
rhr/src/Makevars.win
rhr/src/kdelscv.cpp
rhr/src/msd.cpp
rhr/src/pd.cpp
rhr/src/randomWalk.cpp
rhr/src/t2cpp.cpp
rhr/src/t2cpp.h
rhr/test
rhr/test/utSchoener.R

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