rhr: Package to estimate home ranges through a graphical user interface.

In this package several methods to analyze animal movement data and home range estimation are implemented or wrapped from other packages.

AuthorJohannes Signer
Date of publication2013-11-09 17:04:08
MaintainerJohannes Signer <jmsigner@gmail.com>
LicenseGPL-3
Version0.04
http://www.quantwild.de/rhr

View on R-Forge

Man pages

code: code

cud: Retrives the CUD of an rhrHREstimator object

cud.RhrHREstimator: Retrives the CUD of an rhrHREstimator object

dat: get data from RhrHREstimator

datSH: Tracking data of one red deer in Germany

dfGrob: dfGrob

fidelityBase: Base function to calculate msd and li

h1: h1

h2: h2

h3: h3

h4: h4

hasCUD: Checks if an rhrEstimator posses a cud

hasCUD.RhrHREstimator: Checks if an rhrEstimator posses a cud

hasIsopleths: Checks if an rhrEstimator posses isopleths

hasIsopleths.RhrHREstimator: Check if isopleths are available

hasUD: Checks if an rhrEstimator posses an ud

hasUD.RhrHREstimator: Checks if an rhrEstimator posses a ud

img: img

isopleths: Retrives the isopleths of an rhrHREstimator object

isopleths.RhrHREstimator: get the isopleths from rhrHREstimator

p: p

parameters: Retrieves parameters from estimator

parameters.RhrHREstimator: Retrieves parameters of an object of class RhrHREstimator

plot.RhrHRAsymptote: plot for RhrHRAsymptote

plot.RhrHRCoreArea: plot for RhrHRCoreArea

plot.RhrHREstimator: plot for RhrHREstimator

plot.RhrTTSI: plot for RhrTTSI

plotTTSI: plot ttsi

print.RhrHRAsymptote: print object of rhrHRAsymptote

print.RhrHREstimator: print for RhrHREstimator

print.RhrTTSI: print object of rhrTTSI

printSpRestriction: printSpRestriction

printTemporalRestriction: printTemporalRestriction

rasterFromXYVect: rasterFromXYVect

rhrAlert: rhrAlert Wraps a character as html 'div' with appropriate...

rhrArea: Get areas from object of class RhrHREstimator

rhrAsymptote: Calculate home rnage asymptote for an object of class...

rhrConvertUnit: rhrConvertUnit

rhrCoreArea: Estimate Core Area

rhrCoreArea.RhrHREstimator: Core area for home range estimator

rhrCorrectLevels: rhrCorrectLevels

rhrEstimator: Function to calculate a home range estimator

rhrEstimatorCharacteristic: Function to calculate characteristics of an estimator (i.e....

rhrFidelity: Site fidelity

rhrGUI: GUI

rhrHlscv: Calcualte least square cross validation bandwidth

rhrHpi: Estimate bandwidth with plug in the equation

rhrHref: Calcualte reference bandwidth

rhrHREstimator: rhrHREstimator

rhrKDE: Kernel Density Estimation (KDE)

rhrLoCoH: Local Convex Hull (LoCoH)

rhrMCP: Minimum Convex Polygon (MCP)

rhrSchoener: Schoener's ratio

rhrSetCUD: Generic Function to set CUD

rhrSetCUD.RhrHREstimator: Set the CUD

rhrSetIso: Set the Set isopleth

rhrSetIso.RhrHREstimator: Set isopleth

rhrSetUD: Generic Function to set UD

rhrSetUD.RhrHREstimator: Set the UD

rhrToHTML: rhrToHTML

rhrTTSI: rhrTTSI

strShorten: strShorten

summaryGrob: summaryGrob

toHTML: toHTML: convert R objects as html

ttestGrob: ttestGrob

ud: Retrives the UD of an rhrHREstimator object

ud.RhrHREstimator: Get the UD

Functions

code Man page
cud Man page
cud.RhrHREstimator Man page
dat Man page
datSH Man page
dfGrob Man page
fidelityBase Man page
h1 Man page
h2 Man page
h3 Man page
h4 Man page
hasCUD Man page
hasCUD.RhrHREstimator Man page
hasIsopleths Man page
hasIsopleths.RhrHREstimator Man page
hasUD Man page
hasUD.RhrHREstimator Man page
img Man page
isopleths Man page
isopleths.RhrHREstimator Man page
p Man page
parameters Man page
parameters.RhrHREstimator Man page
plot.RhrHRAsymptote Man page
plot.RhrHRCoreArea Man page
plot.RhrHREstimator Man page
plot.RhrTTSI Man page
plotTTSI Man page
print.RhrHRAsymptote Man page
print.RhrHREstimator Man page
print.RhrTTSI Man page
printSpRestriction Man page
printTemporalRestriction Man page
rasterFromXYVect Man page
rhrAlert Man page
rhrArea Man page
rhrArea.RhrHREstimator Man page
rhrAsymptote Man page
rhrConvertUnit Man page
rhrCoreArea Man page
rhrCoreArea.RhrHREstimator Man page
rhrCoreArea.RhrHREstimator Man page
rhrCorrectLevels Man page
rhrEstimator Man page
rhrEstimatorCharacteristic Man page
rhrFidelity Man page
rhrGUI Man page
rhrHlscv Man page
rhrHpi Man page
rhrHref Man page
rhrHREstimator Man page
rhrKDE Man page
rhrLoCoH Man page
rhrMCP Man page
rhrSchoener Man page
rhrSetCUD Man page
rhrSetCUD.RhrHREstimator Man page
rhrSetIso Man page
rhrSetIso.RhrHREstimator Man page
rhrSetUD Man page
rhrSetUD.RhrHREstimator Man page
rhrToHTML Man page
rhrTTSI Man page
strShorten Man page
summaryGrob Man page
toHTML Man page
toHTML.data.frame Man page
toHTML.htest Man page
toHTML.summaryDefault Man page
ttestGrob Man page
ud Man page
ud.RhrHREstimator Man page

Files

rhr/ChangeLog
rhr/DESCRIPTION
rhr/NAMESPACE
rhr/R
rhr/R/dat.R rhr/R/datSH-data.R rhr/R/fidelity.R rhr/R/isopleths.R rhr/R/parameters.R rhr/R/plot.RhrHREstimator.R rhr/R/rhrAlert.R rhr/R/rhrArea.R rhr/R/rhrAsymptote.R rhr/R/rhrConvertUnit.R rhr/R/rhrCoreArea.R rhr/R/rhrCorrectLevels.R rhr/R/rhrEstKDE.R rhr/R/rhrEstLoCoH.R rhr/R/rhrEstMCP.R rhr/R/rhrEstimator.R rhr/R/rhrEstimatorCharacteristic.R rhr/R/rhrGUI.R rhr/R/rhrHelperFunctions.R rhr/R/rhrHpi.R rhr/R/rhrHref.R rhr/R/rhrLSCV.R rhr/R/rhrSchoener.R rhr/R/rhrTTSI.R rhr/R/zzz.R
rhr/data
rhr/data/datSH.rda
rhr/inst
rhr/inst/app
rhr/inst/app/README
rhr/inst/app/brew
rhr/inst/app/brew/analyze.rhtml
rhr/inst/app/brew/configC2S.rhtml
rhr/inst/app/brew/configS2C.rhtml
rhr/inst/app/brew/initConfig.R
rhr/inst/app/brew/load.rhtml
rhr/inst/app/brew/rAsymptote.R
rhr/inst/app/brew/rCA.R
rhr/inst/app/brew/rKDE.R
rhr/inst/app/brew/rLoCoH.R
rhr/inst/app/brew/rMCP.R
rhr/inst/app/brew/rParams.R
rhr/inst/app/brew/rPost.R
rhr/inst/app/brew/rPrep.R
rhr/inst/app/brew/rSiteFidelity.R
rhr/inst/app/brew/rTTSI.R
rhr/inst/app/brew/reMap.R
rhr/inst/app/brew/reMapRes.rhtml
rhr/inst/app/brew/restriction.R
rhr/inst/app/brew/spRestriction.rhtml
rhr/inst/app/brew/syncConfig.rhtml
rhr/inst/app/brew/temporalRestriction.rhtml
rhr/inst/app/brew/updateConfig.rhtml
rhr/inst/app/config.R
rhr/inst/app/css
rhr/inst/app/css/bootstrap.min.css
rhr/inst/app/img
rhr/inst/app/img/glyphicons-halflings-white.png
rhr/inst/app/img/glyphicons-halflings.png
rhr/inst/app/img/loader.gif
rhr/inst/app/js
rhr/inst/app/js/bootstrap.min.js
rhr/inst/app/js/jquery.validate.min.js
rhr/inst/app/js/jquery18.min.js
rhr/inst/app/js/rhr.js
rhr/inst/app/js/rhrResults.js
rhr/inst/tests
rhr/inst/tests/rhrMCP.R
rhr/inst/tests/run-all.R
rhr/inst/tests/test-rhrFidelity.R
rhr/man
rhr/man/code.Rd rhr/man/cud.Rd rhr/man/cud.RhrHREstimator.Rd rhr/man/dat.Rd rhr/man/datSH.Rd rhr/man/dfGrob.Rd rhr/man/fidelityBase.Rd rhr/man/h1.Rd rhr/man/h2.Rd rhr/man/h3.Rd rhr/man/h4.Rd rhr/man/hasCUD.Rd rhr/man/hasCUD.RhrHREstimator.Rd rhr/man/hasIsopleths.Rd rhr/man/hasIsopleths.RhrHREstimator.Rd rhr/man/hasUD.Rd rhr/man/hasUD.RhrHREstimator.Rd rhr/man/img.Rd rhr/man/isopleths.Rd rhr/man/isopleths.RhrHREstimator.Rd rhr/man/p.Rd rhr/man/parameters.Rd rhr/man/parameters.RhrHREstimator.Rd rhr/man/plot.RhrHRAsymptote.Rd rhr/man/plot.RhrHRCoreArea.Rd rhr/man/plot.RhrHREstimator.Rd rhr/man/plot.RhrTTSI.Rd rhr/man/plotTTSI.Rd rhr/man/print.RhrHRAsymptote.Rd rhr/man/print.RhrHREstimator.Rd rhr/man/print.RhrTTSI.Rd rhr/man/printSpRestriction.Rd rhr/man/printTemporalRestriction.Rd rhr/man/rasterFromXYVect.Rd rhr/man/rhrAlert.Rd rhr/man/rhrArea.Rd rhr/man/rhrAsymptote.Rd rhr/man/rhrConvertUnit.Rd rhr/man/rhrCoreArea.Rd rhr/man/rhrCoreArea.RhrHREstimator.Rd rhr/man/rhrCorrectLevels.Rd rhr/man/rhrEstimator.Rd rhr/man/rhrEstimatorCharacteristic.Rd rhr/man/rhrFidelity.Rd rhr/man/rhrGUI.Rd rhr/man/rhrHREstimator.Rd rhr/man/rhrHlscv.Rd rhr/man/rhrHpi.Rd rhr/man/rhrHref.Rd rhr/man/rhrKDE.Rd rhr/man/rhrLoCoH.Rd rhr/man/rhrMCP.Rd rhr/man/rhrSchoener.Rd rhr/man/rhrSetCUD.Rd rhr/man/rhrSetCUD.RhrHREstimator.Rd rhr/man/rhrSetIso.Rd rhr/man/rhrSetIso.RhrHREstimator.Rd rhr/man/rhrSetUD.Rd rhr/man/rhrSetUD.RhrHREstimator.Rd rhr/man/rhrTTSI.Rd rhr/man/rhrToHTML.Rd rhr/man/strShorten.Rd rhr/man/summaryGrob.Rd rhr/man/toHTML.Rd rhr/man/ttestGrob.Rd rhr/man/ud.Rd rhr/man/ud.RhrHREstimator.Rd
rhr/src
rhr/src/Makevars
rhr/src/Makevars.win
rhr/src/kdelscv.cpp
rhr/src/msd.cpp
rhr/src/pd.cpp
rhr/src/randomWalk.cpp
rhr/src/t2cpp.cpp
rhr/src/t2cpp.h
rhr/test
rhr/test/utSchoener.R

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