rptR: Repeatability for Gaussian and non-Gaussian data

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R functions for calculating repeatability (intra-class correlation) from normal, binary, proportion and count data.

Author
Holger Schielzeth <holger.schielzeth@ebc.uu.se> and Shinichi Nakagawa <shinichi.nakagawa@otago.ac.nz>
Date of publication
2013-07-16 16:26:19
Maintainer
Holger Schielzeth <holger.schielzeth@ebc.uu.se>
License
GPL (>= 2)
Version
0.6.405

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Man pages

BodySize
House Sparrow Body Size Dataset
BroodParasitism
Conspecific Brood Parasitism Dataset
Fledglings
Male House Sparrow Fledgling Success Dataset
print.rpt
Print a rpt object
rpt
Repeatability Calculation for Gaussian and Non-Gaussian Data
rpt.adj
(Adjusted) Repeatability Calculation for Gaussian and...
rpt.aov
ANOVA-based Repeatability
rpt.binomGLMM.add
GLMM-based Repeatability Using MCMC for Binomial Data
rpt.binomGLMM.multi
GLMM-based Repeatability Using PQL Estimation for Binomial...
rpt.corr
Correlation-based Repeatability
rpt.mcmcLMM
LMM-based repeatability estimated using MCMC sampling
rpt.poisGLMM.add
GLMM-based Repeatability Using MCMC for Count Data
rpt.poisGLMM.multi
GLMM-based Repeatability Using PQL Estimation for Count Data
rptR
Repeatability Calculation for Gaussian and Non-Gaussian Ddata
rpt.remlLMM
LMM-based Repeatability Using REML
rpt.remlLMM.adj
LMM-based Repeatability Using REML

Files in this package

rptR/DESCRIPTION
rptR/NAMESPACE
rptR/R
rptR/R/print.rpt.R
rptR/R/rpt.R
rptR/R/rpt.adj.R
rptR/R/rpt.aov.R
rptR/R/rpt.binomGLMM.add.R
rptR/R/rpt.binomGLMM.multi.R
rptR/R/rpt.corr.R
rptR/R/rpt.mcmcLMM.R
rptR/R/rpt.poisGLMM.add.R
rptR/R/rpt.poisGLMM.multi.R
rptR/R/rpt.remlLMM.R
rptR/R/rpt.remlLMM.adj.R
rptR/data
rptR/data/BodySize.txt.gz
rptR/data/BroodParasitism.txt.gz
rptR/data/Fledglings.txt.gz
rptR/man
rptR/man/BodySize.Rd
rptR/man/BroodParasitism.Rd
rptR/man/Fledglings.Rd
rptR/man/print.rpt.Rd
rptR/man/rpt.Rd
rptR/man/rpt.adj.Rd
rptR/man/rpt.aov.Rd
rptR/man/rpt.binomGLMM.add.Rd
rptR/man/rpt.binomGLMM.multi.Rd
rptR/man/rpt.corr.Rd
rptR/man/rpt.mcmcLMM.Rd
rptR/man/rpt.poisGLMM.add.Rd
rptR/man/rpt.poisGLMM.multi.Rd
rptR/man/rpt.remlLMM.Rd
rptR/man/rpt.remlLMM.adj.Rd
rptR/man/rptR.Rd
rptR/www
rptR/www/default_index.php
rptR/www/index.html
rptR/www/style.css