tripEstimation: Metropolis sampler and supporting functions for estimating animal movement from archival tags and satellite fixes
Version 0.0-41

Data handling and estimation functions for animal movement estimation from archival or satellite tags. Helper functions are included for making image summaries binned by time interval from MCMC simulations of point data.

AuthorMichael Sumner and Simon Wotherspoon
Date of publication2013-05-02 12:58:34
MaintainerMichael Sumner <mdsumner@gmail.com>
LicenseGPL-2
Version0.0-41
URL http://staff.acecrc.org.au/~mdsumner/Rutas/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("tripEstimation", repos="http://R-Forge.R-project.org")

Popular man pages

get.mask: Create, access and manipulate spatial masks
get.sst: Read SST data from online service.
julday: Julian day and Julian century calculations from date-time...
norm.proposal: Manage proposal functions tune variance for metropolis...
old.metropolis: Older versions of solar location estimation
pick: Choose twilight segments interactively from light data.
pimg.list: Create a collection of probability images, for MCMC binning.
See all...

All man pages Function index File listing

Man pages

as.image.pimg: Convert to image list
astro: Calculations for position of the sun and moon
behav.bin: Bin MCMC chains.
bits: Set and get bits from binary masks.
chain.read: Manage MCMC cache.
elevation: Calculate elevation of astronomical objects
get.mask: Create, access and manipulate spatial masks
get.sst: Read SST data from online service.
initialize.x: Diagnose and initialize light level estimation.
julday: Julian day and Julian century calculations from date-time...
metropolis: Metropolis-Hastings sampler for location estimation for...
mkCalibration: Create calibration of solar elevation to measured light...
mkLookup: Create a lookup function to query locations against spatial...
norm.proposal: Manage proposal functions tune variance for metropolis...
old.metropolis: Older versions of solar location estimation
pick: Choose twilight segments interactively from light data.
pimg.list: Create a collection of probability images, for MCMC binning.
satellite.model: Function to create a satellite model object for metropolis...
solar: Calculate solar postion parameters
solar.model: Function to create a solar model object for metropolis...

Functions

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/as.image.pimg.R
R/as.local.pimg.R
R/as.matrix.pimg.R
R/astro.R
R/behav.bin.R
R/bin.pimg.R
R/bits.R
R/bmvnorm.proposal.R
R/chain.dim.R
R/chain.read.R
R/chain.write.R
R/chunk.bin.R
R/combine.R
R/coords.pimg.R
R/elevation.R
R/get.mask.R
R/get.pimgs.R
R/get.sst.R
R/initialize.x.R
R/julday.R
R/metropolis.R
R/metropolis0.R
R/mkCalibration.R
R/mkLookup.R
R/mkSmall.R
R/mvnorm.proposal.R
R/norm.proposal.R
R/old.metropolis.R
R/picksegs.R
R/pimg.R
R/pimg.list.R
R/satellite.model.R
R/solar.R
R/solar.model.R
R/unzipper.R
TODO
man
man/as.image.pimg.Rd
man/astro.Rd
man/behav.bin.Rd
man/bits.Rd
man/chain.read.Rd
man/elevation.Rd
man/get.mask.Rd
man/get.sst.Rd
man/initialize.x.Rd
man/julday.Rd
man/metropolis.Rd
man/mkCalibration.Rd
man/mkLookup.Rd
man/norm.proposal.Rd
man/old.metropolis.Rd
man/pick.Rd
man/pimg.list.Rd
man/satellite.model.Rd
man/solar.Rd
man/solar.model.Rd
tripEstimation documentation built on May 21, 2017, 12:57 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.