readSequence: read sequences from file
In ASEB: Predict Acetylated Lysine Sites
Description
Usage
Arguments
Details
Value
See Also
Examples
Description
This function is used to read sequences from FASTA format file.
Usage
1
Arguments
file
character(1), file name for input.
The input file should follow FASTA format.
Details
This function return an object of SequenceInfo that
contains sequences and identifiers from FASTA format input file.
Value
A SequenceInfo object containing sequences and identifiers from input file.
See Also
SequenceInfo,
asebSites,
asebProteins,
drawStat,
drawEScurve.
Examples
1
2
ff <- system.file("extdata", "background_sites.fa", package="ASEB")
readSequence(ff)
ASEB documentation built on Nov. 8, 2020, 5:07 p.m.
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Description Usage Arguments Details Value See Also Examples
Description
This function is used to read sequences from FASTA format file.
Usage
1 |
Arguments
file |
character(1), file name for input. |
Details
This function return an object of SequenceInfo that
contains sequences and identifiers from FASTA format input file.
Value
A SequenceInfo object containing sequences and identifiers from input file.
See Also
SequenceInfo,
asebSites,
asebProteins,
drawStat,
drawEScurve.
Examples
1 2 | ff <- system.file("extdata", "background_sites.fa", package="ASEB")
readSequence(ff)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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