AffyRNADegradation: Analyze and correct probe positional bias in microarray data due to RNA degradation

The package helps with the assessment and correction of RNA degradation effects in Affymetrix 3' expression arrays. The parameter d gives a robust and accurate measure of RNA integrity. The correction removes the probe positional bias, and thus improves comparability of samples that are affected by RNA degradation.

Package details

AuthorMario Fasold
Bioconductor views GeneExpression Microarray OneChannel Preprocessing QualityControl
MaintainerMario Fasold <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


Try the AffyRNADegradation package in your browser

Any scripts or data that you put into this service are public.

AffyRNADegradation documentation built on Nov. 8, 2020, 5:36 p.m.