Einter: Sample intensities for human promoter tiling array.

In AffyTiling: Easy extraction of individual probes in Affymetrix tiling arrays

Description

Einter is a data frame consisting of 3 position information columns (Unique ID, Start position of probe, Chromosome) and normalized intensity data from 4 samples. Data is given for the first 3Mb of human chromosomes 1-3.

From the Affymetrix human promoter tiling array v02-3.

Full description is given below...

UniqueID

A unique ID for each probe.

START

The start position of each probe.

CHR

The chromosome of each probe.

X19.103.10009.CEL

Normalized, Log-2 transformed intensities for sample X19.103.10009.

X19.104.10013.CEL

Normalized, Log-2 transformed intensities for sample X19.104.10013.

X19.107.10027.CEL

Normalized, Log-2 transformed intensities for sample X19.107.10027.

X19.104.10013.CEL

Normalized, Log-2 transformed intensities for sample X19.104.10013.

Usage

data(KnownGenes)

Format

data frame

Source

Unpublished data, courtesy of Yanli Zhang and Frank Middleton.

AffyTiling documentation built on Oct. 5, 2016, 4:12 a.m.