print.Assessment: Print Assessment Objects

In AssessORF: Assess Gene Predictions Using Proteomics and Evolutionary Conservation

Description

The print method for Assessment objects

Usage

## S3 method for class 'Assessment'
print(x, ...)

Arguments

x	An object of class Assessment and of either subclass DataMap or subclass Results.
...	Further printing parameters.

Details

If x is of subclass DataMap, the length of the genome is printed along with any supplied identifying information for the genome.

If x is of subclass Results, the number of genes in each category and the accuracy scores are printed out along with any supplied identifying information.

Value

Invisibly returns the input object x

See Also

Assessment-class

Examples

print(readRDS(system.file("extdata",
                          "MGAS5005_PreSaved_DataMapObj.rds",
                          package = "AssessORF")))

print(readRDS(system.file("extdata",
                          "MGAS5005_PreSaved_ResultsObj_Prodigal.rds",
                          package = "AssessORF")))

AssessORF documentation built on Nov. 8, 2020, 4:52 p.m.