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For RNA sequencing count data, BADER fits a Bayesian hierarchical model. The algorithm returns the posterior probability of differential expression for each gene between two groups A and B. The joint posterior distribution of the variables in the model can be returned in the form of posterior samples, which can be used for further down-stream analyses such as gene set enrichment.
Package details |
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Author | Andreas Neudecker, Matthias Katzfuss |
Bioconductor views | DifferentialExpression ImmunoOncology RNASeq SAGE Sequencing Software |
Maintainer | Andreas Neudecker <a.neudecker@arcor.de> |
License | GPL-2 |
Version | 1.28.0 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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