Biocview "SAGE"

AnnoProbe

Annotate the Gene Symbols for Probes in Expression Array

xiayh17/RNAseqStat

A Pipeline to Process RNAseq Data

xiayh17/RNAseqStat2

A Pipeline to Process RNAseq Data

BADER

Bayesian Analysis of Differential Expression in RNA Sequencing Data

sagenhaft

Collection of functions for reading and comparing SAGE libraries

DongmeiLi2017/Combine

ComSeq: An ensemble method for RNA-Seq differential analysis

DongmeiLi2017/ComSeq

ComSeq: An ensemble method for RNA-Seq differential analysis

aghozlane/DESeq2shaman

Differential gene expression analysis based on the negative binomial distribution

nlhuong/ZeroInflatedDESeq2

Differential gene expression analysis based on the negative binomial distribution

DESeq

Differential gene expression analysis based on the negative binomial distribution

DA

Discriminant Analysis for Evolutionary Inference

xinghuq/DA

Discriminant Analysis for Evolutionary Inference

OliverVoogd/edgeR

Empirical Analysis of Digital Gene Expression Data in R

edgeR

Empirical Analysis of Digital Gene Expression Data in R

hiraksarkar/edgeR_fork

Empirical Analysis of Digital Gene Expression Data in R

baySeq

Empirical Bayesian analysis of patterns of differential expression in count data

jamesdalg/HiClink

Get data from NCBI Gene Expression Omnibus (GEO)

ian1roberts/GEOquery

Get data from NCBI Gene Expression Omnibus (GEO)

GEOquery

Get data from NCBI Gene Expression Omnibus (GEO)

seandavi/GEOquery

Get data from NCBI Gene Expression Omnibus (GEO)

MiRaGE

MiRNA Ranking by Gene Expression

Yuande/MBttest

Multiple Beta t-Tests

MBttest

Multiple Beta t-Tests

NBBttest

Negative Binomial Beta t-Test

rnaSeqMap

rnaSeq secondary analyses