DESeq
Differential gene expression analysis based on the negative binomial distribution

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DESeq: Differential gene expression analysis based on the negative binomial distribution

DESeq: Differential gene expression analysis based on the negative binomial distribution

Estimate variance-mean dependence in count data from high-throughput sequencing assays and test for differential expression based on a model using the negative binomial distribution

Getting started

Analysing RNA-Seq data with the "DESeq" package

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Vignettes Man pages API and functions Files

Package details
AuthorSimon Anders, EMBL Heidelberg <sanders@fs.tum.de>
Bioconductor views ChIPSeq DifferentialExpression ImmunoOncology RNASeq SAGE Sequencing
MaintainerSimon Anders <sanders@fs.tum.de>
LicenseGPL (>= 3)
Version1.39.0
URL http://www-huber.embl.de/users/anders/DESeq 
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R: 
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DESeq")

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DESeq documentation built on April 28, 2020, 6:37 p.m.

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